RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ST8SIA5O15466 376 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 TLL1O43897 1013 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 FRAT2O75474 233 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-245ENST00000556958 WFS1O76024 890 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 SLC19A1P41440 591 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 RIPK4P57078 832 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 NEXNQ0ZGT2 675 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 APOBEC3HQ6NTF7 200 aaKnown RBP7.33□□□□□ -1.24
ATXN3-245ENST00000556958 MICALL1Q8N3F8 863 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 GPRC5AQ8NFJ5 357 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 PLEKHF1Q96S99 279 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 MORF4L1Q9UBU8 362 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 LRRFIP2Q9Y608 721 aaKnown RBP7.33□□□□□ -1.24
ATXN3-245ENST00000556958 MAST3O60307 1309 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 FAM187AA6NFU0 413 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 WIPF1O43516 503 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 CTNND1O60716 968 aaKnown RBP7.32□□□□□ -1.24
ATXN3-245ENST00000556958 GLRX3O76003 335 aaKnown RBP7.32□□□□□ -1.24
ATXN3-245ENST00000556958 CSF1RP07333 972 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 CLTBP09497 229 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 EPHB4P54760 987 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 TLE2Q04725 743 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 SNX17Q15036 470 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 VPS37DQ86XT2 251 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 EDC3Q96F86 508 aaKnown RBP7.32□□□□□ -1.24
ATXN3-245ENST00000556958 APBA2Q99767 749 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 CWC22Q9HCG8 908 aaKnown RBP7.32□□□□□ -1.24
ATXN3-245ENST00000556958 AAASQ9NRG9 546 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 CDH23Q9H251 3354 aa7.32□□□□□ -1.24
ATXN3-245ENST00000556958 ZSWIM8A7E2V4 1837 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 LAMB2P55268 1798 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 H7C1W4 665 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 KIAA0355O15063 1070 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 PLIN1O60240 522 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 IRX3P78415 501 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 TCP10Q12799 353 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 IFIT5Q13325 482 aaKnown RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 UBE4AQ14139 1066 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 KRT24Q2M2I5 525 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 TREML2Q5T2D2 321 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 GJC2Q5T442 439 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 DUSP27Q5VZP5 1158 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 ERMP1Q7Z2K6 904 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 USP6NLQ92738 828 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 DDX12PQ92771 950 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 HLA-CQ95604 372 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 PLA2G12BQ9BX93 195 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 TBC1D2Q9BYX2 928 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 ASCC2Q9H1I8 757 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 MTIF3Q9H2K0 278 aaKnown RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 PHAXQ9H814 394 aaKnown RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 TMEM39AQ9NV64 488 aa7.31□□□□□ -1.24
ATXN3-245ENST00000556958 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
ATXN3-245ENST00000556958 UTYO14607 1347 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 PPP2R1AP30153 589 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 COPS2P61201 443 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 NFX1Q12986 1120 aaKnown RBP7.3□□□□□ -1.24
ATXN3-245ENST00000556958 MAP2K5Q13163 448 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 CCL14Q16627 93 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 MORN1Q5T089 497 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 LDHAL6AQ6ZMR3 332 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 UBE3BQ7Z3V4 1068 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 PLEKHH3Q7Z736 793 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 ZNF598Q86UK7 904 aaKnown RBP7.3□□□□□ -1.24
ATXN3-245ENST00000556958 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-245ENST00000556958 FAM84BQ96KN1 310 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-245ENST00000556958 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 CACNA1GO43497 2377 aa7.3□□□□□ -1.24
ATXN3-245ENST00000556958 PSME4Q14997 1843 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 DCDC2CA8MYV0 355 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-245ENST00000556958 ITGB8P26012 769 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 GYG1P46976 350 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 SPP2Q13103 211 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 CHAF1AQ13111 956 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-245ENST00000556958 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-245ENST00000556958 CAVIN4Q5BKX8 364 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 TAF7LQ5H9L4 462 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 KSR2Q6VAB6 950 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 GJD3Q8N144 294 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 SLC44A5Q8NCS7 719 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 PRRX2Q99811 253 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-245ENST00000556958 FAM198AQ9UFP1 575 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
ATXN3-245ENST00000556958 GRXCR1A8MXD5 290 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 GDF9O60383 454 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 IGKV5-2P06315 115 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms