RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 HMMRO75330 724 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 TRIM27P14373 513 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 NOS3P29474 1203 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 NUCB1Q02818 461 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 FZD5Q13467 585 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 DMRTC2Q8IXT2 367 aaPredicted RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 RAPGEF4Q8WZA2 1011 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 TTC9Q92623 222 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 ANP32BQ92688 251 aaKnown RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
CPSF2-205ENST00000556622 NOB1Q9ULX3 412 aaKnown RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 MAP2P11137 1827 aaKnown RBP7.5□□□□□ -1.21
CPSF2-205ENST00000556622 FLT4P35916 1363 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 ICMTO60725 284 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 BRD1O95696 1058 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 HSP90AA1P07900 732 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 TAL1P17542 331 aaPredicted RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 MZF1P28698 734 aaPredicted RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 IRAK1P51617 712 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 AFF1P51825 1210 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 NRLP54845 237 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 GPLD1P80108 840 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 EZH2Q15910 746 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 CHD1LQ86WJ1 897 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 RPAP2Q8IXW5 612 aaPredicted RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 SSH1Q8WYL5 1049 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 ACSBG1Q96GR2 724 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 DNAJB12Q9NXW2 375 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 SLC6A14Q9UN76 642 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 HDAC5Q9UQL6 1122 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
CPSF2-205ENST00000556622 KIF20BQ96Q89 1820 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 PTPRCP08575 1304 aa7.49□□□□□ -1.21
CPSF2-205ENST00000556622 RTL1A6NKG5 1358 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 USP54Q70EL1 1684 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 RARAP10276 462 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 MPSTP25325 297 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
CPSF2-205ENST00000556622 PRR23CQ6ZRP0 262 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 GPR152Q8TDT2 470 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 CAMKK2Q96RR4 588 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 FRRS1LQ9P0K9 344 aa7.48□□□□□ -1.21
CPSF2-205ENST00000556622 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CPSF2-205ENST00000556622 COL3A1P02461 1466 aaPredicted RBP7.48□□□□□ -1.21
CPSF2-205ENST00000556622 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 ABCC6O95255 1503 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 GOLGA6L3A6NEY3 463 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 KCNQ2O43526 872 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 HTATSF1O43719 755 aaKnown RBP7.47□□□□□ -1.21
CPSF2-205ENST00000556622 MMP20O60882 483 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 PRKAR2BP31323 418 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 CD97P48960 835 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 EIF4A2Q14240 407 aaKnown RBP7.47□□□□□ -1.21
CPSF2-205ENST00000556622 ATCAYQ86WG3 371 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 FAM43AQ8N2R8 423 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
CPSF2-205ENST00000556622 KRTAP4-2Q9BYR5 136 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 UBE2OQ9C0C9 1292 aaKnown RBP7.47□□□□□ -1.21
CPSF2-205ENST00000556622 IGFLR1Q9H665 355 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
CPSF2-205ENST00000556622 OVOS2A0A0G2JMS6 1433 aa7.46□□□□□ -1.21
CPSF2-205ENST00000556622 PLSCR1O15162 318 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 EPB41L2O43491 1005 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 FZD6O60353 706 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 CDC45O75419 566 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 REC8O95072 547 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 MED26O95402 600 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 PDGFAP04085 211 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 HSP90AB1P08238 724 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 MCM2P49736 904 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 MRE11P49959 708 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 PTF1AQ7RTS3 328 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 OR13H1Q8NG92 308 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 RTF1Q92541 710 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 CWC22Q9HCG8 908 aaKnown RBP7.46□□□□□ -1.22
CPSF2-205ENST00000556622 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 RNF114Q9Y508 228 aa7.46□□□□□ -1.22
CPSF2-205ENST00000556622 DISP2A7MBM2 1401 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 PARP4Q9UKK3 1724 aaKnown RBP7.45□□□□□ -1.22
CPSF2-205ENST00000556622 VAMP4O75379 141 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 FRAT2O75474 233 aaPredicted RBP7.45□□□□□ -1.22
CPSF2-205ENST00000556622 ZNF853P0CG23 659 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 RLBP1P12271 317 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 FSTP19883 344 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 IL13P35225 146 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 NUCB2P80303 420 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 PLAURQ03405 335 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 PSAPL1Q6NUJ1 521 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms