RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 USP17L2Q6R6M4 530 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 CLEC10AQ8IUN9 316 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 TNS4Q8IZW8 715 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-217ENST00000556533 PARK7Q99497 189 aaKnown RBP20.34■□□□□ 0.85
PSEN1-217ENST00000556533 ZNF287Q9HBT7 754 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 CPA4Q9UI42 421 aa20.34■□□□□ 0.85
PSEN1-217ENST00000556533 TLR2O60603 784 aa20.33■□□□□ 0.85
PSEN1-217ENST00000556533 CHMLP26374 656 aa20.33■□□□□ 0.85
PSEN1-217ENST00000556533 ERICH6BQ5W0A0 696 aa20.33■□□□□ 0.85
PSEN1-217ENST00000556533 INCENPQ9NQS7 918 aa20.33■□□□□ 0.85
PSEN1-217ENST00000556533 EMILIN3Q9NT22 766 aa20.33■□□□□ 0.85
PSEN1-217ENST00000556533 BAZ2AQ9UIF9 1905 aaKnown RBP20.33■□□□□ 0.84
PSEN1-217ENST00000556533 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-217ENST00000556533 OSBPP22059 807 aa20.32■□□□□ 0.84
PSEN1-217ENST00000556533 HAND2P61296 217 aa20.32■□□□□ 0.84
PSEN1-217ENST00000556533 SP3Q02447 781 aa20.32■□□□□ 0.84
PSEN1-217ENST00000556533 ICA1Q05084 483 aa20.32■□□□□ 0.84
PSEN1-217ENST00000556533 PABPC4Q13310 644 aaKnown RBP eCLIP20.32■□□□□ 0.84
PSEN1-217ENST00000556533 NOM1Q5C9Z4 860 aaKnown RBP20.32■□□□□ 0.84
PSEN1-217ENST00000556533 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
PSEN1-217ENST00000556533 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 USP14P54578 494 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 FAM47AQ5JRC9 791 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 CD99L2Q8TCZ2 262 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-217ENST00000556533 KIAA1683Q9H0B3 1180 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 KANSL2Q9H9L4 492 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 ARHGEF10LQ9HCE6 1279 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 TOMM22Q9NS69 142 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 SLC45A1Q9Y2W3 748 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 ROBO3Q96MS0 1386 aa20.31■□□□□ 0.84
PSEN1-217ENST00000556533 EEF2P13639 858 aaKnown RBP20.3■□□□□ 0.84
PSEN1-217ENST00000556533 SIAH1Q8IUQ4 282 aa20.3■□□□□ 0.84
PSEN1-217ENST00000556533 PNMA3Q9UL41 463 aa20.3■□□□□ 0.84
PSEN1-217ENST00000556533 RAD21O60216 631 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 TSPY3P0CV98 308 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 TSPY8P0CW00 308 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-217ENST00000556533 TFAP4Q01664 338 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 RRP12Q5JTH9 1297 aaKnown RBP20.29■□□□□ 0.84
PSEN1-217ENST00000556533 CTU1Q7Z7A3 348 aaKnown RBP20.29■□□□□ 0.84
PSEN1-217ENST00000556533 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.29■□□□□ 0.84
PSEN1-217ENST00000556533 ASCC2Q9H1I8 757 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-217ENST00000556533 IL25Q9H293 177 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 ANAPC4Q9UJX5 808 aa20.29■□□□□ 0.84
PSEN1-217ENST00000556533 ZNF213O14771 459 aa20.28■□□□□ 0.84
PSEN1-217ENST00000556533 RANBP6O60518 1105 aaKnown RBP20.28■□□□□ 0.84
PSEN1-217ENST00000556533 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
PSEN1-217ENST00000556533 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 KIF22Q14807 665 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 BMP2KLQ5H9B9 411 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
PSEN1-217ENST00000556533 DSCC1Q9BVC3 393 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 SH2D4AQ9H788 454 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 CLIP2Q9UDT6 1046 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 TACC3Q9Y6A5 838 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.84
PSEN1-217ENST00000556533 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 VCAM1P19320 739 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 HOXA7P31268 230 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-217ENST00000556533 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 ANKRD13CQ8N6S4 541 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 MCOLN1Q9GZU1 580 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 RPAP3Q9H6T3 665 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-217ENST00000556533 CTNNA3Q9UI47 895 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
PSEN1-217ENST00000556533 TMX2Q9Y320 296 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 TRIM17Q9Y577 477 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 RAD50Q92878 1312 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 ADGRA2Q96PE1 1338 aa20.26■□□□□ 0.83
PSEN1-217ENST00000556533 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 TSPY2A6NKD2 308 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 KIAA1755Q5JYT7 1200 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 NEDD1Q8NHV4 660 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 LAMB1P07942 1786 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 ZMYM6O95789 1325 aa20.25■□□□□ 0.83
PSEN1-217ENST00000556533 SGSM2O43147 1006 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 BCRP11274 1271 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-217ENST00000556533 PTH1RQ03431 593 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 ARHGEF6Q15052 776 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 IMMTQ16891 758 aaKnown RBP20.24■□□□□ 0.83
PSEN1-217ENST00000556533 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-217ENST00000556533 TBC1D10CQ8IV04 446 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms