RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 CCNA1P78396 465 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 TTF1Q15361 905 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 CERKLQ49MI3 558 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 MAP3K21Q5TCX8 1036 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 PORCNQ9H237 461 aa21.42■■□□□ 1.02
SDR39U1-219ENST00000556523 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 IL1RAPL2Q9NP60 686 aa21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 OGDHLQ9ULD0 1010 aa21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
SDR39U1-219ENST00000556523 MAGEB6P1A0A0J9YX57 407 aa21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 Q3C1V9 767 aa21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 CRNKL1Q9BZJ0 848 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 KIAA1683Q9H0B3 1180 aa21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 ZMYND8Q9ULU4 1186 aaPredicted RBP21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 RANBP2P49792 3224 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-219ENST00000556523 VCAM1P19320 739 aa21.39■■□□□ 1.01
SDR39U1-219ENST00000556523 CLASRPQ8N2M8 674 aaKnown RBP21.39■■□□□ 1.01
SDR39U1-219ENST00000556523 RIOK1Q9BRS2 568 aaKnown RBP21.39■■□□□ 1.01
SDR39U1-219ENST00000556523 MS4A1P11836 297 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 CACNB2Q08289 660 aaPredicted RBP21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 MAP2K5Q13163 448 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 MORN1Q5T089 497 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 RHPN1Q8TCX5 695 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 USP6NLQ92738 828 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 DNAJC2Q99543 621 aaKnown RBP21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 IVNS1ABPQ9Y6Y0 642 aa21.38■■□□□ 1.01
SDR39U1-219ENST00000556523 APBB1O00213 710 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 HMMRO75330 724 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 PDE6AP16499 860 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 SHMT1P34896 483 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 CCL14Q16627 93 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 MFSD14CQ5VZR4 134 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
SDR39U1-219ENST00000556523 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 MPHOSPH10O00566 681 aaKnown RBP21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 IFIT2P09913 472 aaKnown RBP21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 MNX1P50219 401 aaPredicted RBP21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 PLCD1P51178 756 aa21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 KIF1BPQ96EK5 621 aa21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 RPAP3Q9H6T3 665 aaPredicted RBP21.36■■□□□ 1.01
SDR39U1-219ENST00000556523 SLC15A5A6NIM6 579 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 GOLIM4O00461 696 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 CNMDO75829 334 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 SYN1P17600 705 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 CCND3P30281 292 aaPredicted RBP21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 POTEEQ6S8J3 1075 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 LBX2Q6XYB7 198 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 GDF15Q99988 308 aa21.35■■□□□ 1.01
SDR39U1-219ENST00000556523 PFASO15067 1338 aa21.34■■□□□ 1.01
SDR39U1-219ENST00000556523 ZNF532Q9HCE3 1301 aa21.34■■□□□ 1.01
SDR39U1-219ENST00000556523 BMP8BP34820 402 aa21.34■■□□□ 1.01
SDR39U1-219ENST00000556523 SEPT2Q15019 361 aa21.34■■□□□ 1.01
SDR39U1-219ENST00000556523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
SDR39U1-219ENST00000556523 SPDYE16A6NNV3 312 aaPredicted RBP21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 SOX1O00570 391 aaPredicted RBP21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 PTPREP23469 700 aa21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 GABPAQ06546 454 aa21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 LRCH3Q96II8 777 aa21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 TANGO6Q9C0B7 1094 aa21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 FRMPD3Q5JV73 1810 aa21.33■■□□□ 1.01
SDR39U1-219ENST00000556523 MYH8P13535 1937 aa21.33■■□□□ 1
SDR39U1-219ENST00000556523 MAGEA10P43363 369 aaPredicted RBP21.32■■□□□ 1
SDR39U1-219ENST00000556523 ATP2B2Q01814 1243 aa21.32■■□□□ 1
SDR39U1-219ENST00000556523 RPAP2Q8IXW5 612 aaPredicted RBP21.32■■□□□ 1
SDR39U1-219ENST00000556523 SDR42E1Q8WUS8 393 aa21.32■■□□□ 1
SDR39U1-219ENST00000556523 BTBD7Q9P203 1132 aa21.32■■□□□ 1
SDR39U1-219ENST00000556523 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
SDR39U1-219ENST00000556523 GUCY1A2P33402 732 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 GRB14Q14449 540 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 LHX8Q68G74 356 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 TMEM179Q6ZVK1 233 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 LCORLQ8N3X6 602 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 SWAP70Q9UH65 585 aa21.31■■□□□ 1
SDR39U1-219ENST00000556523 SZT2Q5T011 3432 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 MSCO60682 206 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 RAB11FIP3O75154 756 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 COL6A1P12109 1028 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 CNGA1P29973 690 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
SDR39U1-219ENST00000556523 DCP1AQ9NPI6 582 aaPredicted RBP21.3■■□□□ 1
SDR39U1-219ENST00000556523 TCRBV5S4A2TA0A5A2 114 aa21.29■■□□□ 1
SDR39U1-219ENST00000556523 HOXC6P09630 235 aa21.29■■□□□ 1
SDR39U1-219ENST00000556523 COG2Q14746 738 aa21.29■■□□□ 1
SDR39U1-219ENST00000556523 UBE2OQ9C0C9 1292 aaKnown RBP21.29■■□□□ 1
SDR39U1-219ENST00000556523 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 1
SDR39U1-219ENST00000556523 CHMP4BQ9H444 224 aaKnown RBP21.29■■□□□ 1
SDR39U1-219ENST00000556523 SH2D4AQ9H788 454 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms