RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SPATA31A6Q5VVP1 1343 aa5.89□□□□□ -1.47
ATXN3-241ENST00000556374 WASHC2AQ641Q2 1341 aa5.89□□□□□ -1.47
ATXN3-241ENST00000556374 ROCK2O75116 1388 aaKnown RBP5.89□□□□□ -1.47
ATXN3-241ENST00000556374 KIAA1107Q9UPP5 1409 aa5.89□□□□□ -1.47
ATXN3-241ENST00000556374 ABCC3O15438 1527 aa5.89□□□□□ -1.47
ATXN3-241ENST00000556374 SLIT1O75093 1534 aa5.89□□□□□ -1.47
ATXN3-241ENST00000556374 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-241ENST00000556374 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 GIPC1O14908 333 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 BRD1O95696 1058 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 RAB6AP20340 208 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 MEX3CQ5U5Q3 659 aaKnown RBP5.88□□□□□ -1.47
ATXN3-241ENST00000556374 GGT6Q6P531 493 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 ZNF765Q7L2R6 523 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 THEMISQ8N1K5 641 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-241ENST00000556374 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 PIDD1Q9HB75 910 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 PCOLCE2Q9UKZ9 415 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 PPP1R9AQ9ULJ8 1098 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 SLC5A6Q9Y289 635 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 PCDHGC5Q9Y5F6 944 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 SPAG9O60271 1321 aaKnown RBP5.88□□□□□ -1.47
ATXN3-241ENST00000556374 ZBED9Q6R2W3 1325 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 TMEM94Q12767 1356 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 RALGAPBQ86X10 1494 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 ARHGAP23Q9P227 1491 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 MBD5Q9P267 1494 aa5.88□□□□□ -1.47
ATXN3-241ENST00000556374 BIN1O00499 593 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 ECEL1O95672 775 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 ERVK-24P63145 666 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 DTHD1Q6ZMT9 781 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 PAK6Q9NQU5 681 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-241ENST00000556374 CACNA2D2Q9NY47 1150 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 CFDP1Q9UEE9 299 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-241ENST00000556374 VAV3Q9UKW4 847 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 ANKRD30BQ9BXX2 1392 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 PLEKHH2Q8IVE3 1493 aa5.87□□□□□ -1.47
ATXN3-241ENST00000556374 GPATCH8Q9UKJ3 1502 aaKnown RBP5.87□□□□□ -1.47
ATXN3-241ENST00000556374 EIF2AK4Q9P2K8 1649 aaKnown RBP5.87□□□□□ -1.47
ATXN3-241ENST00000556374 CEP152O94986 1710 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 ARHGEF5Q12774 1597 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 ERVK-7P63135 1459 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 USP47Q96K76 1375 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 ZNF862O60290 1169 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 FAAP100Q0VG06 881 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 DSC3Q14574 896 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 PDZD3Q86UT5 571 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 SMYD4Q8IYR2 804 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-241ENST00000556374 SHISA5Q8N114 240 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 FLCNQ8NFG4 579 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 NETO1Q8TDF5 533 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 BCL7CQ8WUZ0 217 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-241ENST00000556374 CCDC86Q9H6F5 360 aaKnown RBP5.86□□□□□ -1.47
ATXN3-241ENST00000556374 PPM1HQ9ULR3 514 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 DAGLAQ9Y4D2 1042 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
ATXN3-241ENST00000556374 ANKRD50Q9ULJ7 1429 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 TREHO43280 583 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 NME2P22392 152 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 PLCB3Q01970 1234 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 FAM9BQ8IZU0 186 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 POU5F2Q8N7G0 328 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 RETREG2Q8NC44 543 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 POLR3GLQ9BT43 218 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 CEP44Q9C0F1 390 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 PRKRIP1Q9H875 184 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-241ENST00000556374 DISC1Q9NRI5 854 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 E9PCH4 1651 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 PIK3C2BO00750 1634 aa5.85□□□□□ -1.47
ATXN3-241ENST00000556374 CCDC141Q6ZP82 1450 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 EP400Q96L91 3159 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 MSH6P52701 1360 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 CFAP65Q6ZU64 1925 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 KTN1Q86UP2 1357 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 KIF7Q2M1P5 1343 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 FANCIQ9NVI1 1328 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 LIG1P18858 919 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 ARNTP27540 789 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 PRKCQQ04759 706 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 ENOX2Q16206 610 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 ZNF326Q5BKZ1 582 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 ZC3H12AQ5D1E8 599 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 TMC7Q7Z402 723 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 EPS8L3Q8TE67 593 aaKnown RBP5.84□□□□□ -1.47
ATXN3-241ENST00000556374 BCO2Q9BYV7 579 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 LAMC1P11047 1609 aa5.84□□□□□ -1.47
ATXN3-241ENST00000556374 MAST1Q9Y2H9 1570 aa5.84□□□□□ -1.48
ATXN3-241ENST00000556374 SMG6Q86US8 1419 aaKnown RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 KIF15Q9NS87 1388 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 AFF2P51816 1311 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 GSTT1P30711 240 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 FCGRTP55899 365 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 ZNF252P-AS1Q0IIN9 211 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 ATG4DQ86TL0 474 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 WDR89Q96FK6 387 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms