RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ROBO3Q96MS0 1386 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
ACTN1-217ENST00000556203 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
ACTN1-217ENST00000556203 OSBPP22059 807 aa18.13■□□□□ 0.49
ACTN1-217ENST00000556203 CAP1Q01518 475 aa18.13■□□□□ 0.49
ACTN1-217ENST00000556203 PABPC4Q13310 644 aaKnown RBP eCLIP18.13■□□□□ 0.49
ACTN1-217ENST00000556203 PKN2Q16513 984 aaKnown RBP18.13■□□□□ 0.49
ACTN1-217ENST00000556203 ZNF589Q86UQ0 364 aaPredicted RBP18.13■□□□□ 0.49
ACTN1-217ENST00000556203 MKNK2Q9HBH9 465 aa18.13■□□□□ 0.49
ACTN1-217ENST00000556203 DIAPH3Q9NSV4 1193 aa18.13■□□□□ 0.49
ACTN1-217ENST00000556203 USP14P54578 494 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 LACTBP83111 547 aaPredicted RBP18.12■□□□□ 0.49
ACTN1-217ENST00000556203 PPARAQ07869 468 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 CENPQQ7L2Z9 268 aaPredicted RBP18.12■□□□□ 0.49
ACTN1-217ENST00000556203 OTOP1Q7RTM1 612 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 ARHGAP39Q9C0H5 1083 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 KIAA1683Q9H0B3 1180 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 EFCC1Q9HA90 598 aa18.12■□□□□ 0.49
ACTN1-217ENST00000556203 A0A1W2PRG0 241 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 HIP1O00291 1037 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 CAPN15O75808 1086 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-217ENST00000556203 BCRP11274 1271 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 ICA1Q05084 483 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 KIF22Q14807 665 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
ACTN1-217ENST00000556203 CLEC10AQ8IUN9 316 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 ASCC2Q9H1I8 757 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-217ENST00000556203 ZNF287Q9HBT7 754 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 CCDC171Q6TFL3 1326 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 PTPRFP10586 1907 aa18.11■□□□□ 0.49
ACTN1-217ENST00000556203 LOC285556D6RIA3 1793 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 PRDM1O75626 825 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 NEFLP07196 543 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 SLC3A2P08195 630 aaKnown RBP18.1■□□□□ 0.49
ACTN1-217ENST00000556203 HSPD1P10809 573 aaKnown RBP18.1■□□□□ 0.49
ACTN1-217ENST00000556203 RASA1P20936 1047 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 HOXA7P31268 230 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-217ENST00000556203 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-217ENST00000556203 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 ANKRD13CQ8N6S4 541 aa18.1■□□□□ 0.49
ACTN1-217ENST00000556203 VCAM1P19320 739 aa18.09■□□□□ 0.49
ACTN1-217ENST00000556203 MFAP1P55081 439 aaKnown RBP18.09■□□□□ 0.49
ACTN1-217ENST00000556203 ALX1Q15699 326 aa18.09■□□□□ 0.49
ACTN1-217ENST00000556203 FBXO46Q6PJ61 603 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-217ENST00000556203 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
ACTN1-217ENST00000556203 ZNF444Q8N0Y2 327 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-217ENST00000556203 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
ACTN1-217ENST00000556203 KANSL2Q9H9L4 492 aa18.09■□□□□ 0.49
ACTN1-217ENST00000556203 ARHGEF10LQ9HCE6 1279 aa18.09■□□□□ 0.49
ACTN1-217ENST00000556203 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-217ENST00000556203 CTGFP29279 349 aa18.08■□□□□ 0.48
ACTN1-217ENST00000556203 PSMC4P43686 418 aa18.08■□□□□ 0.48
ACTN1-217ENST00000556203 ATP2B2Q01814 1243 aa18.08■□□□□ 0.48
ACTN1-217ENST00000556203 PDE4BQ07343 736 aa18.08■□□□□ 0.48
ACTN1-217ENST00000556203 P2RX7Q99572 595 aaKnown RBP18.08■□□□□ 0.48
ACTN1-217ENST00000556203 HPS5Q9UPZ3 1129 aa18.08■□□□□ 0.48
ACTN1-217ENST00000556203 CCDC85CA6NKD9 419 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L15C9J2P7 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L13C9JLJ4 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L11C9JVI0 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L18D6R9N7 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L22D6RA61 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L17D6RBQ6 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L19D6RCP7 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L20D6RJB6 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 FGAP02671 866 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
ACTN1-217ENST00000556203 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
ACTN1-217ENST00000556203 CTDSPL2Q05D32 466 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 USP17L24Q0WX57 530 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 PTPN22Q9Y2R2 807 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 TMX2Q9Y320 296 aa18.07■□□□□ 0.48
ACTN1-217ENST00000556203 FMNL1O95466 1100 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-217ENST00000556203 FCGRTP55899 365 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 HERVK_113P62684 666 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 FAM110CQ1W6H9 321 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 TRIM47Q96LD4 638 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 RPAP3Q9H6T3 665 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-217ENST00000556203 ANAPC4Q9UJX5 808 aa18.06■□□□□ 0.48
ACTN1-217ENST00000556203 GNRH1P01148 92 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 FAM47AQ5JRC9 791 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 KIAA1755Q5JYT7 1200 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 CATSPERGQ6ZRH7 1159 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 SPICE1Q8N0Z3 855 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 VCPKMTQ9H867 229 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 INCENPQ9NQS7 918 aa18.05■□□□□ 0.48
ACTN1-217ENST00000556203 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
ACTN1-217ENST00000556203 ZMYM6O95789 1325 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 IGKV6D-41A0A0C4DH26 115 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 TSPY3P0CV98 308 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 TSPY8P0CW00 308 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 HAND2P61296 217 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 TFAP4Q01664 338 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 GTF3C2Q8WUA4 911 aaPredicted RBP18.04■□□□□ 0.48
ACTN1-217ENST00000556203 LPAR1Q92633 364 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms