RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 XDHP47989 1333 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 C4AP0C0L4 1744 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 GOLGA6L3A6NEY3 463 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 WTIPA6NIX2 430 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 POLRMTO00411 1230 aaKnown RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 NPHP1O15259 732 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 APPP05067 770 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 PCP11498 1178 aaKnown RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 CYP7A1P22680 504 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 RXRBP28702 533 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 NT5C2P49902 561 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 ANTXR2P58335 489 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 ZNF445P59923 1031 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 QPCTQ16769 361 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 SPTY2D1Q68D10 685 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 NAA16Q6N069 864 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 RPGRQ92834 1020 aaKnown RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
ATXN3-235ENST00000556082 NAPBQ9H115 298 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 ARMT1Q9H993 441 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 DOCK2Q92608 1830 aa9.74□□□□□ -0.85
ATXN3-235ENST00000556082 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 LIFRP42702 1097 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 HAND2P61296 217 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 DDR1Q08345 913 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 AGERQ15109 404 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 AKNAD1Q5T1N1 836 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 TBC1D10CQ8IV04 446 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 LCORLQ8N3X6 602 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 GPT2Q8TD30 523 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 STAG1Q8WVM7 1258 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 KRT23Q9C075 422 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 RNF41Q9H4P4 317 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 EPB41L4AQ9HCS5 686 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-235ENST00000556082 RAI14Q9P0K7 980 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 SLC4A4Q9Y6R1 1079 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 MYH7P12883 1935 aa9.73□□□□□ -0.85
ATXN3-235ENST00000556082 COL1A1P02452 1464 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 FGRP09769 529 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 NCLP19338 710 aaKnown RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 MRE11P49959 708 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 STK3Q13188 491 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 IGDCC4Q8TDY8 1250 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 TSC1Q92574 1164 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 NSUN4Q96CB9 384 aaKnown RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 LRRC2Q9BYS8 371 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 GZF1Q9H116 711 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 ANKIB1Q9P2G1 1089 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 ABCF2Q9UG63 623 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
ATXN3-235ENST00000556082 ANGEL1Q9UNK9 670 aaKnown RBP9.72□□□□□ -0.85
ATXN3-235ENST00000556082 A0A1B0GUL6 1792 aa9.71□□□□□ -0.85
ATXN3-235ENST00000556082 BRWD3Q6RI45 1802 aa9.71□□□□□ -0.85
ATXN3-235ENST00000556082 PRKAB2O43741 272 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 JAK2O60674 1132 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 APBA3O96018 575 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 BMP1P13497 986 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 TIMP2P16035 220 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 KLRK1P26718 216 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 RCAN1P53805 252 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
ATXN3-235ENST00000556082 UBE2HP62256 183 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 MECOMQ03112 1051 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
ATXN3-235ENST00000556082 MFSD6Q6ZSS7 791 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 ADGRA1Q86SQ6 560 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 CERS3Q8IU89 383 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 SP8Q8IXZ3 490 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 FAM184AQ8NB25 1140 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 ZNF384Q8TF68 577 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-235ENST00000556082 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 STK17AQ9UEE5 414 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-235ENST00000556082 ELP1O95163 1332 aa9.71□□□□□ -0.86
ATXN3-235ENST00000556082 KLF18A0A0U1RQI7 1052 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 PTPDC1A2A3K4 754 aa9.7□□□□□ -0.86
ATXN3-235ENST00000556082 VPS37CA5D8V6 355 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms