RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	PTPN21	Q16825	1174 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	SUSD4	Q5VX71	490 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	E4F1	Q66K89	784 aa	Predicted RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	PRDM4	Q9UKN5	801 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	MST1R	Q04912	1400 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	SIPA1L3	O60292	1781 aa	Predicted RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	FOXP2	O15409	715 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	TRIM37	O94972	964 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	LDHB	P07195	334 aa	Known RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	TRIM28	Q13263	835 aa	Known RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	IQCE	Q6IPM2	695 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	FAM196A	Q6ZSG2	479 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	CNNM2	Q9H8M5	875 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	RIPOR2	Q9Y4F9	1068 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	CPD	O75976	1380 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	CSF1R	P07333	972 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	SHC4	Q6S5L8	630 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	FANCL	Q9NW38	375 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	KCNJ14	Q9UNX9	436 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	TUBB4A	P04350	444 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	TSPY3	P0CV98	308 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	TSPY8	P0CW00	308 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	CHRND	Q07001	517 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	KARS	Q15046	597 aa	Known RBP	13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	ERCC6L	Q2NKX8	1250 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	MAATS1	Q7Z4T9	603 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	SENP2	Q9HC62	589 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	KRBA2	Q6ZNG9	492 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	DIS3L2	Q8IYB7	885 aa	Known RBP	13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	IFNL3	Q8IZI9	196 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	RABEP2	Q9H5N1	569 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	PCDHA5	Q9Y5H7	936 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	KIF1A	Q12756	1690 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	GOLGA8F	Q08AF8	430 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	GOLGA8DP	Q0D2H9	430 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	LONRF3	Q496Y0	759 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	ERFE	Q4G0M1	354 aa		13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	QTRT2	Q9H974	415 aa	Known RBP	13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	DDX41	Q9UJV9	622 aa	Known RBP	13.88	□□□□□ -0.19
TMPO-212	ENST00000556029	NEDD4	P46934	1319 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	ABCC12	Q96J65	1359 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	BTBD18	B2RXH4	712 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	AKR1B10	O60218	316 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	ARFGAP3	Q9NP61	516 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	LZTFL1	Q9NQ48	299 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	TMOD2	Q9NZR1	351 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	KMT5B	Q4FZB7	885 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	NOSTRIN	Q8IVI9	506 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	PLA2G12B	Q9BX93	195 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	SEC63	Q9UGP8	760 aa	Known RBP	13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	PUF60	Q9UHX1	559 aa	Known RBP	13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	ARFGEF2	Q9Y6D5	1785 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	CCDC194	A0A1B0GVG4	234 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	APBA3	O96018	575 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	UBA7	P41226	1012 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	FBXO38	Q6PIJ6	1188 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	ZNF804A	Q7Z570	1209 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	MMRN2	Q9H8L6	949 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	ZNF287	Q9HBT7	754 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	CEP131	Q9UPN4	1083 aa		13.87	□□□□□ -0.19
TMPO-212	ENST00000556029	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	3e-7	■□□□□ 10.8
TMPO-212	ENST00000556029	POLR2D	O15514	142 aa	Known RBP	13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	RESP18	Q5W5W9	173 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	STRBP	Q96SI9	672 aa	Known RBP	13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	ZSWIM5	Q9P217	1185 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	ETF1	P62495	437 aa	Known RBP	13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	ARID5A	Q03989	594 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	NCAPH	Q15003	741 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	GPIHBP1	Q8IV16	184 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	EIF6	P56537	245 aa	Known RBP	13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	MAP9	Q49MG5	647 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	AKNAD1	Q5T1N1	836 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	C10orf67	Q8IYJ2	551 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	DPF2	Q92785	391 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	MROH5	Q6ZUA9	1318 aa		13.86	□□□□□ -0.19
TMPO-212	ENST00000556029	NKX1-1	Q15270	411 aa	Predicted RBP	13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	ATRIP	Q8WXE1	791 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	LY9	Q9HBG7	655 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	CAMTA1	Q9Y6Y1	1673 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	ANKRD2	Q9GZV1	360 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	TUBE1	Q9UJT0	475 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	UBN2	Q6ZU65	1347 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	KIF20A	O95235	890 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	RHOXF2B	P0C7M4	288 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	CAPN2	P17655	700 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	TRIM21	P19474	475 aa	Known RBP	13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	POSTN	Q15063	836 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	RILPL1	Q5EBL4	403 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	RHOXF2	Q9BQY4	288 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	SERTAD1	Q9UHV2	236 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	NFE2L3	Q9Y4A8	694 aa		13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	GABPB1	Q06547	395 aa	Predicted RBP	13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	BAG1	Q99933	345 aa	Predicted RBP	13.85	□□□□□ -0.19
TMPO-212	ENST00000556029	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	CDHR2	Q9BYE9	1310 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	USO1	O60763	962 aa	Known RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	ZNF827	Q17R98	1081 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	TRMT44	Q8IYL2	757 aa	Known RBP	13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms