RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ERVK-9P63128 1117 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 ERVK-24P63145 666 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L24Q0WX57 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 HABP4Q5JVS0 413 aaKnown RBP15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 C20orf194Q5TEA3 1177 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 FEZ1Q99689 392 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 TXNRD2Q9NNW7 524 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 NAV1Q8NEY1 1877 aa15.34■□□□□ 0.05
HNRNPC-221ENST00000555883 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
HNRNPC-221ENST00000555883 LCORLQ8N3X6 602 aa15.34■□□□□ 0.05
HNRNPC-221ENST00000555883 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
HNRNPC-221ENST00000555883 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
HNRNPC-221ENST00000555883 FARP2O94887 1054 aaPredicted RBP15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 VCAM1P19320 739 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 GUCY1A2P33402 732 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 MAP3K21Q5TCX8 1036 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 CATSPERGQ6ZRH7 1159 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 SDR42E1Q8WUS8 393 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 USP6NLQ92738 828 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 EDC3Q96F86 508 aaKnown RBP15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.33■□□□□ 0.049e-29■■■■□ 21.1
HNRNPC-221ENST00000555883 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
HNRNPC-221ENST00000555883 CCNA1P78396 465 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 DEFB118Q96PH6 123 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 DCTPP1Q9H773 170 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-221ENST00000555883 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 H0YGN5 161 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 MBD4O95243 580 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 TFRCP02786 760 aaKnown RBP15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 Q3C1V9 767 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 MORN1Q5T089 497 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 GPR142Q7Z601 462 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 PLEKHH3Q7Z736 793 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 TRIB2Q92519 343 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
HNRNPC-221ENST00000555883 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 RGS2P41220 211 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 SEPT2Q15019 361 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 C12orf60Q5U649 245 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 LPAR1Q92633 364 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 DPF3Q92784 378 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 GPATCH3Q96I76 525 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 APBA2Q99767 749 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 PORCNQ9H237 461 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 NR2E3Q9Y5X4 410 aa15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 RANBP2P49792 3224 aaKnown RBP15.3■□□□□ 0.04
HNRNPC-221ENST00000555883 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 CNMDO75829 334 aa15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 PAGR1Q9BTK6 254 aa15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 DOCK3Q8IZD9 2030 aa15.29■□□□□ 0.04
HNRNPC-221ENST00000555883 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 PRKAB2O43741 272 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 HOXC6P09630 235 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 ZKSCAN1P17029 563 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 CYP2B6P20813 491 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 EVX2Q03828 476 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 COG2Q14746 738 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 GIMAP6Q6P9H5 292 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 C16orf86Q6ZW13 317 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 ARPP21Q9UBL0 812 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
HNRNPC-221ENST00000555883 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 USP17L21D6R901 530 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 PEX10O60683 326 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 CYP2D6P10635 497 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 MAP2K5Q13163 448 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 SLC44A5Q8NCS7 719 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 PUS7LQ9H0K6 701 aaKnown RBP15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 ARHGEF10LQ9HCE6 1279 aa15.27■□□□□ 0.04
HNRNPC-221ENST00000555883 TTC41PQ6P2S7 1318 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SMARCA5O60264 1052 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms