RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 CCDC84Q86UT8 332 aaPredicted RBP27.23■■□□□ 1.95
CDKN3-208ENST00000555837 ZMYM6O95789 1325 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 MYH8P13535 1937 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 CYP2D7A0A087X1C5 515 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 HOXA7P31268 230 aaPredicted RBP27.22■■□□□ 1.95
CDKN3-208ENST00000555837 NT5C2P49902 561 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 IRX3P78415 501 aaPredicted RBP27.22■■□□□ 1.95
CDKN3-208ENST00000555837 C12orf42Q96LP6 360 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 FAM227BQ96M60 508 aa27.22■■□□□ 1.95
CDKN3-208ENST00000555837 EPB41L4AQ9HCS5 686 aaPredicted RBP27.22■■□□□ 1.95
CDKN3-208ENST00000555837 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.22■■□□□ 1.95
CDKN3-208ENST00000555837 A0A0D9SFI3 127 aa27.21■■□□□ 1.95
CDKN3-208ENST00000555837 PPARAQ07869 468 aa27.21■■□□□ 1.95
CDKN3-208ENST00000555837 SEPT2Q15019 361 aa27.21■■□□□ 1.95
CDKN3-208ENST00000555837 CWC27Q6UX04 472 aaKnown RBP27.21■■□□□ 1.95
CDKN3-208ENST00000555837 SLC44A5Q8NCS7 719 aa27.21■■□□□ 1.95
CDKN3-208ENST00000555837 PTPRFP10586 1907 aa27.2■■□□□ 1.95
CDKN3-208ENST00000555837 PCP11498 1178 aaKnown RBP27.2■■□□□ 1.94
CDKN3-208ENST00000555837 ICA1Q05084 483 aa27.2■■□□□ 1.94
CDKN3-208ENST00000555837 C17orf99Q6UX52 265 aa27.2■■□□□ 1.94
CDKN3-208ENST00000555837 LPAR1Q92633 364 aa27.2■■□□□ 1.94
CDKN3-208ENST00000555837 R3HDMLQ9H3Y0 253 aa27.2■■□□□ 1.94
CDKN3-208ENST00000555837 RAD50Q92878 1312 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 HOXD10P28358 340 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 JAG1P78504 1218 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 CCDC129Q6ZRS4 1044 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 EFCC1Q9HA90 598 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 CTNNA3Q9UI47 895 aa27.19■■□□□ 1.94
CDKN3-208ENST00000555837 HSPD1P10809 573 aaKnown RBP27.18■■□□□ 1.94
CDKN3-208ENST00000555837 AKR1B1P15121 316 aa27.18■■□□□ 1.94
CDKN3-208ENST00000555837 PRMT2P55345 433 aa27.18■■□□□ 1.94
CDKN3-208ENST00000555837 ANAPC4Q9UJX5 808 aa27.18■■□□□ 1.94
CDKN3-208ENST00000555837 LOC285556D6RIA3 1793 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L15C9J2P7 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L13C9JLJ4 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L11C9JVI0 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L18D6R9N7 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L22D6RA61 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L17D6RBQ6 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L19D6RCP7 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L20D6RJB6 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 USP17L24Q0WX57 530 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 TREML2Q5T2D2 321 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 MCOLN1Q9GZU1 580 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 GOPCQ9HD26 462 aa27.17■■□□□ 1.94
CDKN3-208ENST00000555837 TSPY3P0CV98 308 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 TSPY8P0CW00 308 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 CYP2C8P10632 490 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 LACTBP83111 547 aaPredicted RBP27.16■■□□□ 1.94
CDKN3-208ENST00000555837 FBXO46Q6PJ61 603 aaPredicted RBP27.16■■□□□ 1.94
CDKN3-208ENST00000555837 RNF41Q9H4P4 317 aaPredicted RBP27.16■■□□□ 1.94
CDKN3-208ENST00000555837 CPA4Q9UI42 421 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 SYNPO2Q9UMS6 1093 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 TRIM17Q9Y577 477 aa27.16■■□□□ 1.94
CDKN3-208ENST00000555837 FGAP02671 866 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 GSPT1P15170 499 aaKnown RBP27.15■■□□□ 1.94
CDKN3-208ENST00000555837 RASA1P20936 1047 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 GUCY1A2P33402 732 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 CD99L2Q8TCZ2 262 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 DSCC1Q9BVC3 393 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 ASCC2Q9H1I8 757 aaPredicted RBP27.15■■□□□ 1.94
CDKN3-208ENST00000555837 EMILIN3Q9NT22 766 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 TMX2Q9Y320 296 aa27.15■■□□□ 1.94
CDKN3-208ENST00000555837 FAM110CQ1W6H9 321 aa27.14■■□□□ 1.94
CDKN3-208ENST00000555837 ADGRA2Q96PE1 1338 aa27.14■■□□□ 1.93
CDKN3-208ENST00000555837 BCRP11274 1271 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 FCGRTP55899 365 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 ATP2B2Q01814 1243 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 EVX2Q03828 476 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 ZYXQ15942 572 aaKnown RBP27.13■■□□□ 1.93
CDKN3-208ENST00000555837 SHROOM1Q2M3G4 852 aaPredicted RBP27.13■■□□□ 1.93
CDKN3-208ENST00000555837 VPS53Q5VIR6 699 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 NYAP2Q9P242 653 aa27.13■■□□□ 1.93
CDKN3-208ENST00000555837 ZNF213O14771 459 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 CASC1Q6TDU7 716 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 OTOP1Q7RTM1 612 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 ZNF589Q86UQ0 364 aaPredicted RBP27.12■■□□□ 1.93
CDKN3-208ENST00000555837 STK11IPQ8N1F8 1099 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 ACER1Q8TDN7 264 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 HOXC10Q9NYD6 342 aa27.12■■□□□ 1.93
CDKN3-208ENST00000555837 TSPY2A6NKD2 308 aa27.11■■□□□ 1.93
CDKN3-208ENST00000555837 FMNL1O95466 1100 aaPredicted RBP27.11■■□□□ 1.93
CDKN3-208ENST00000555837 EEF2P13639 858 aaKnown RBP27.11■■□□□ 1.93
CDKN3-208ENST00000555837 VCAM1P19320 739 aa27.11■■□□□ 1.93
CDKN3-208ENST00000555837 NEDD1Q8NHV4 660 aa27.11■■□□□ 1.93
CDKN3-208ENST00000555837 VCPKMTQ9H867 229 aa27.11■■□□□ 1.93
CDKN3-208ENST00000555837 PPP4R2Q9NY27 417 aa27.11■■□□□ 1.93
CDKN3-208ENST00000555837 WDR46O15213 610 aaKnown RBP27.1■■□□□ 1.93
CDKN3-208ENST00000555837 ORC4O43929 436 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 TTLL1O95922 423 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 HERVK_113P62684 666 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 IMMTQ16891 758 aaKnown RBP27.1■■□□□ 1.93
CDKN3-208ENST00000555837 BMP2KLQ5H9B9 411 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 CATSPERGQ6ZRH7 1159 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 MFSD6Q6ZSS7 791 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 CCAR1Q8IX12 1150 aaKnown RBP27.1■■□□□ 1.93
CDKN3-208ENST00000555837 ABHD8Q96I13 439 aa27.1■■□□□ 1.93
CDKN3-208ENST00000555837 PLIN4Q96Q06 1357 aa27.09■■□□□ 1.93
CDKN3-208ENST00000555837 PRDM1O75626 825 aa27.09■■□□□ 1.93
CDKN3-208ENST00000555837 CHMLP26374 656 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms