RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
SEC23A-209ENST00000555363 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
SEC23A-209ENST00000555363 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
SEC23A-209ENST00000555363 TNK2Q07912 1038 aa8.62□□□□□ -1.03
SEC23A-209ENST00000555363 MESP2Q0VG99 397 aa8.62□□□□□ -1.03
SEC23A-209ENST00000555363 TTC6Q86TZ1 520 aa8.62□□□□□ -1.03
SEC23A-209ENST00000555363 MRPL41Q8IXM3 137 aaKnown RBP8.62□□□□□ -1.03
SEC23A-209ENST00000555363 NISCHQ9Y2I1 1504 aa8.61□□□□□ -1.03
SEC23A-209ENST00000555363 BPNT1O95861 308 aa8.61□□□□□ -1.03
SEC23A-209ENST00000555363 TFE3P19532 575 aaPredicted RBP8.61□□□□□ -1.03
SEC23A-209ENST00000555363 RPL6Q02878 288 aaKnown RBP8.61□□□□□ -1.03
SEC23A-209ENST00000555363 PRR23BQ6ZRT6 265 aa8.61□□□□□ -1.03
SEC23A-209ENST00000555363 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
SEC23A-209ENST00000555363 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
SEC23A-209ENST00000555363 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
SEC23A-209ENST00000555363 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
SEC23A-209ENST00000555363 CREG2Q8IUH2 290 aa8.6□□□□□ -1.03
SEC23A-209ENST00000555363 BHLHE22Q8NFJ8 381 aaPredicted RBP8.6□□□□□ -1.03
SEC23A-209ENST00000555363 PIWIL2Q8TC59 973 aaKnown RBP8.6□□□□□ -1.03
SEC23A-209ENST00000555363 DIRC2Q96SL1 478 aa8.6□□□□□ -1.03
SEC23A-209ENST00000555363 TRIT1Q9H3H1 467 aaKnown RBP8.6□□□□□ -1.03
SEC23A-209ENST00000555363 TLR6Q9Y2C9 796 aa8.6□□□□□ -1.03
SEC23A-209ENST00000555363 PLCG1P19174 1290 aa8.59□□□□□ -1.03
SEC23A-209ENST00000555363 FAM13CQ8NE31 585 aa8.59□□□□□ -1.03
SEC23A-209ENST00000555363 ABHD4Q8TB40 342 aa8.59□□□□□ -1.03
SEC23A-209ENST00000555363 TOX2Q96NM4 488 aa8.59□□□□□ -1.03
SEC23A-209ENST00000555363 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
SEC23A-209ENST00000555363 ADAM30Q9UKF2 790 aa8.59□□□□□ -1.03
SEC23A-209ENST00000555363 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.58□□□□□ -1.04
SEC23A-209ENST00000555363 HK2P52789 917 aa8.58□□□□□ -1.04
SEC23A-209ENST00000555363 FBXO33Q7Z6M2 555 aa8.58□□□□□ -1.04
SEC23A-209ENST00000555363 MCATQ8IVS2 390 aaKnown RBP8.58□□□□□ -1.04
SEC23A-209ENST00000555363 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
SEC23A-209ENST00000555363 C19orf73Q9NVV2 129 aa8.58□□□□□ -1.04
SEC23A-209ENST00000555363 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
SEC23A-209ENST00000555363 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
SEC23A-209ENST00000555363 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
SEC23A-209ENST00000555363 CHMP4BP1P59074 171 aa8.57□□□□□ -1.04
SEC23A-209ENST00000555363 ANKLE2Q86XL3 938 aa8.57□□□□□ -1.04
SEC23A-209ENST00000555363 FBXO15Q8NCQ5 510 aaPredicted RBP8.57□□□□□ -1.04
SEC23A-209ENST00000555363 ACSF2Q96CM8 615 aaPredicted RBP8.57□□□□□ -1.04
SEC23A-209ENST00000555363 NOC4LQ9BVI4 516 aaKnown RBP8.57□□□□□ -1.04
SEC23A-209ENST00000555363 GPATCH2Q9NW75 528 aa8.57□□□□□ -1.04
SEC23A-209ENST00000555363 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
SEC23A-209ENST00000555363 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 LOC105371045A0A1W2PR82 267 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 NFIBO00712 420 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 VAMP1P23763 118 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 TNNI2P48788 182 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
SEC23A-209ENST00000555363 RALGPS1Q5JS13 557 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 ZSCAN18Q8TBC5 510 aaPredicted RBP8.56□□□□□ -1.04
SEC23A-209ENST00000555363 MYLIPQ8WY64 445 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 DUSP13Q9UII6 198 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
SEC23A-209ENST00000555363 F6X3S4 739 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 TSPAN15O95858 294 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 DAB2P98082 770 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 PHC3Q8NDX5 983 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 CYB5D2Q8WUJ1 264 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 MRS2Q9HD23 443 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
SEC23A-209ENST00000555363 SHROOM4Q9ULL8 1493 aa8.55□□□□□ -1.04
SEC23A-209ENST00000555363 ESR1P03372 595 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 TMEM253P0C7T8 217 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 LTKP29376 864 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 LCE1DQ5T752 114 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 RELL1Q8IUW5 271 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 DNAJB8Q8NHS0 232 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 FAM161BQ96MY7 647 aa8.54□□□□□ -1.04
SEC23A-209ENST00000555363 WASH4PA8MWX3 477 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 UPK3BL1B0FP48 263 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 UPK3BL2E5RIL1 263 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 RBAK-RBAKDNI3L0D1 243 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 TCF3P15923 654 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 TAGLNQ01995 201 aaKnown RBP8.53□□□□□ -1.04
SEC23A-209ENST00000555363 FBLN7Q53RD9 439 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 BNC2Q6ZN30 1099 aaPredicted RBP8.53□□□□□ -1.04
SEC23A-209ENST00000555363 CCDC84Q86UT8 332 aaPredicted RBP8.53□□□□□ -1.04
SEC23A-209ENST00000555363 Q96M66 194 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 ADAMTS10Q9H324 1103 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
SEC23A-209ENST00000555363 GBP2P32456 591 aaPredicted RBP8.52□□□□□ -1.05
SEC23A-209ENST00000555363 EGR3Q06889 387 aa8.52□□□□□ -1.05
SEC23A-209ENST00000555363 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
SEC23A-209ENST00000555363 KRTAP19-4Q3LI73 84 aa8.52□□□□□ -1.05
SEC23A-209ENST00000555363 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
SEC23A-209ENST00000555363 DUSP15Q9H1R2 295 aaPredicted RBP8.52□□□□□ -1.05
SEC23A-209ENST00000555363 VTI1BQ9UEU0 232 aa8.52□□□□□ -1.05
SEC23A-209ENST00000555363 SORBS3O60504 671 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 PF4P02776 101 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 ITGAEP38570 1179 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 ERVFC1P60507 584 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 SPOCD1Q6ZMY3 1216 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 TMC4Q7Z404 712 aa8.51□□□□□ -1.05
SEC23A-209ENST00000555363 LRRC56Q8IYG6 542 aaPredicted RBP8.51□□□□□ -1.05
SEC23A-209ENST00000555363 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
SEC23A-209ENST00000555363 C1QTNF9P0C862 333 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms