RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 CHRNA5P30532 468 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
IFT43-209ENST00000555305 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
IFT43-209ENST00000555305 IL17RBQ9NRM6 502 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 SERPINA10Q9UK55 444 aa16.76■□□□□ 0.27
IFT43-209ENST00000555305 MORC2Q9Y6X9 1032 aaPredicted RBP16.76■□□□□ 0.27
IFT43-209ENST00000555305 CCDC93Q567U6 631 aa16.75■□□□□ 0.27
IFT43-209ENST00000555305 PSMD1Q99460 953 aa16.75■□□□□ 0.27
IFT43-209ENST00000555305 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
IFT43-209ENST00000555305 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
IFT43-209ENST00000555305 PCDHA7Q9UN72 937 aa16.75■□□□□ 0.27
IFT43-209ENST00000555305 BMP15O95972 392 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 SMARCA1P28370 1054 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 CRKP46108 304 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 GRM4Q14833 912 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 DACT2Q5SW24 774 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 EHD4Q9H223 541 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 CLIC4Q9Y696 253 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 V9GY48 417 aaPredicted RBP16.74■□□□□ 0.27
IFT43-209ENST00000555305 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
IFT43-209ENST00000555305 NMT2O60551 498 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 NR1I2O75469 434 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 CMA1P23946 247 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 KRT2P35908 639 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 PHF20Q9BVI0 1012 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 GJB4Q9NTQ9 266 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
IFT43-209ENST00000555305 WDHD1O75717 1129 aaPredicted RBP16.73■□□□□ 0.27
IFT43-209ENST00000555305 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
IFT43-209ENST00000555305 CALML3P27482 149 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 NOVP48745 357 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 PKN1Q16512 942 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
IFT43-209ENST00000555305 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 FSIP1Q8NA03 581 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
IFT43-209ENST00000555305 FTOQ9C0B1 505 aaKnown RBP eCLIP16.73■□□□□ 0.27
IFT43-209ENST00000555305 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
IFT43-209ENST00000555305 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
IFT43-209ENST00000555305 PLEKHA8P1O95397 391 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 SCG2P13521 617 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 EVX2Q03828 476 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 GABPAQ06546 454 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 GALNT17Q6IS24 598 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
IFT43-209ENST00000555305 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 NOL7Q9UMY1 257 aaKnown RBP16.72■□□□□ 0.27
IFT43-209ENST00000555305 SLX4Q8IY92 1834 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 BTBD18B2RXH4 712 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 PICALMQ13492 652 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
IFT43-209ENST00000555305 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 IDI2Q9BXS1 227 aa16.72■□□□□ 0.27
IFT43-209ENST00000555305 ECM29Q5VYK3 1845 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 CDK5RAP2Q96SN8 1893 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 PPIP5K2O43314 1243 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 CUTAO60888 179 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 TGFB2P61812 414 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 AOC3Q16853 763 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
IFT43-209ENST00000555305 CCDC148Q8NFR7 591 aa16.71■□□□□ 0.27
IFT43-209ENST00000555305 TRAPPC10P48553 1259 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 SCNN1DP51172 638 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
IFT43-209ENST00000555305 PTPAQ15257 358 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 FMR1NBQ8N0W7 255 aaPredicted RBP16.7■□□□□ 0.26
IFT43-209ENST00000555305 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 CCDC12Q8WUD4 166 aaPredicted RBP16.7■□□□□ 0.26
IFT43-209ENST00000555305 TIGD1Q96MW7 591 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
IFT43-209ENST00000555305 PALM3A6NDB9 673 aaPredicted RBP16.69■□□□□ 0.26
IFT43-209ENST00000555305 C21orf2O43822 256 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
IFT43-209ENST00000555305 TYRO3Q06418 890 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 CAMK4Q16566 473 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 HS1BP3Q53T59 392 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
IFT43-209ENST00000555305 MAD2L2Q9UI95 211 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 MYH1P12882 1939 aa16.69■□□□□ 0.26
IFT43-209ENST00000555305 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms