RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NKX2-3Q8TAU0 364 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 EMILIN3Q9NT22 766 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 CASP8AP2Q9UKL3 1982 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 PTPRFP10586 1907 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 FGAP02671 866 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 CHMLP26374 656 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 BACE1P56817 501 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 SH3D19Q5HYK7 790 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 OTUD7BQ6GQQ9 843 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 NACAP1Q9BZK3 213 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 NBPF3Q9H094 633 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 AS3MTQ9HBK9 375 aa14.75□□□□□ -0.05
SYNE2-214ENST00000554928 ECM2O94769 699 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-214ENST00000554928 ALX1Q15699 326 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 TICAM2Q86XR7 235 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 CABP5Q9NP86 173 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 GINM1Q9NU53 330 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 CPA4Q9UI42 421 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 AGTPBP1Q9UPW5 1226 aa14.74□□□□□ -0.05
SYNE2-214ENST00000554928 USP17L10C9JJH3 530 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 PEX10O60683 326 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 HAND2P61296 217 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 FAM47AQ5JRC9 791 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 TMEM179Q6ZVK1 233 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 FASTKD5Q7L8L6 764 aaKnown RBP14.73□□□□□ -0.05
SYNE2-214ENST00000554928 ZFYVE28Q9HCC9 887 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 PPP4R2Q9NY27 417 aa14.73□□□□□ -0.05
SYNE2-214ENST00000554928 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNE2-214ENST00000554928 HIP1O00291 1037 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 TLR2O60603 784 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 FKTNO75072 461 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 CTGFP29279 349 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 TBC1D10CQ8IV04 446 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
SYNE2-214ENST00000554928 CD99L2Q8TCZ2 262 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 ARHGAP39Q9C0H5 1083 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 MKNK2Q9HBH9 465 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 ZCCHC17Q9NP64 241 aaKnown RBP14.72□□□□□ -0.05
SYNE2-214ENST00000554928 LOC285556D6RIA3 1793 aa14.72□□□□□ -0.05
SYNE2-214ENST00000554928 IGKV6D-41A0A0C4DH26 115 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
SYNE2-214ENST00000554928 PTH1RQ03431 593 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 ICA1Q05084 483 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 NOM1Q5C9Z4 860 aaKnown RBP14.71□□□□□ -0.05
SYNE2-214ENST00000554928 USP17L2Q6R6M4 530 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 C17orf99Q6UX52 265 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 CCDC17Q96LX7 622 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 FEZ1Q99689 392 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 ANAPC4Q9UJX5 808 aa14.71□□□□□ -0.05
SYNE2-214ENST00000554928 C19orf81C9J6K1 198 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 BCRP11274 1271 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
SYNE2-214ENST00000554928 ASCC2Q9H1I8 757 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-214ENST00000554928 TMOD4Q9NZQ9 345 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 ZSWIM8A7E2V4 1837 aa14.7□□□□□ -0.06
SYNE2-214ENST00000554928 ZMYM6O95789 1325 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 GREB1LQ9C091 1923 aaPredicted RBP14.69□□□□□ -0.06
SYNE2-214ENST00000554928 SGSM2O43147 1006 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 NMT2O60551 498 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 VCAM1P19320 739 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 TFAP4Q01664 338 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 ATP2B2Q01814 1243 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 SP3Q02447 781 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 BMP2KLQ5H9B9 411 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 TNS4Q8IZW8 715 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 SPICE1Q8N0Z3 855 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 P2RX7Q99572 595 aaKnown RBP14.69□□□□□ -0.06
SYNE2-214ENST00000554928 MCOLN1Q9GZU1 580 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 SLC45A1Q9Y2W3 748 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 TAF6LQ9Y6J9 622 aa14.69□□□□□ -0.06
SYNE2-214ENST00000554928 NEDD4P46934 1319 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 MYH8P13535 1937 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 FGRP09769 529 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 PDE4BQ07343 736 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 ERICH6BQ5W0A0 696 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 ZNF444Q8N0Y2 327 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-214ENST00000554928 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 CEP95Q96GE4 821 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 DSCC1Q9BVC3 393 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 KANSL2Q9H9L4 492 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 TMX2Q9Y320 296 aa14.68□□□□□ -0.06
SYNE2-214ENST00000554928 RAD50Q92878 1312 aa14.67□□□□□ -0.06
SYNE2-214ENST00000554928 HOXA7P31268 230 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-214ENST00000554928 MFAP1P55081 439 aaKnown RBP14.67□□□□□ -0.06
SYNE2-214ENST00000554928 RRP12Q5JTH9 1297 aaKnown RBP14.67□□□□□ -0.06
SYNE2-214ENST00000554928 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
SYNE2-214ENST00000554928 OTOP1Q7RTM1 612 aa14.67□□□□□ -0.06
SYNE2-214ENST00000554928 CTU1Q7Z7A3 348 aaKnown RBP14.67□□□□□ -0.06
SYNE2-214ENST00000554928 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
SYNE2-214ENST00000554928 RPAP3Q9H6T3 665 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-214ENST00000554928 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms