RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 USP17L13C9JLJ4 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L11C9JVI0 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L18D6R9N7 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L22D6RA61 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L17D6RBQ6 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L19D6RCP7 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L20D6RJB6 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 HLA-DOAP06340 250 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 PTPREP23469 700 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 USP17L24Q0WX57 530 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
TUBB3-207ENST00000554927 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-207ENST00000554927 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 SLC39A5Q6ZMH5 540 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-207ENST00000554927 TTC28Q96AY4 2481 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 VCANP13611 3396 aa16.23■□□□□ 0.19
TUBB3-207ENST00000554927 FLT1P17948 1338 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 SRGAP3O43295 1099 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 CNMDO75829 334 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 GH2P01242 217 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 TRIM60Q495X7 471 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
TUBB3-207ENST00000554927 COL9A1P20849 921 aa16.21■□□□□ 0.19
TUBB3-207ENST00000554927 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
TUBB3-207ENST00000554927 TRPV1Q8NER1 839 aa16.21■□□□□ 0.19
TUBB3-207ENST00000554927 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
TUBB3-207ENST00000554927 SPTBN5Q9NRC6 3674 aaKnown RBP16.21■□□□□ 0.19
TUBB3-207ENST00000554927 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 HOXC6P09630 235 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 ARID4AP29374 1257 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-207ENST00000554927 MCAMP43121 646 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
TUBB3-207ENST00000554927 GRB14Q14449 540 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 METTL16Q86W50 562 aaKnown RBP16.2■□□□□ 0.18
TUBB3-207ENST00000554927 FERMT2Q96AC1 680 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 MEIS3Q99687 375 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 PDLIM7Q9NR12 457 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
TUBB3-207ENST00000554927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-207ENST00000554927 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 TNFRSF10AO00220 468 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 CYBAP13498 195 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 ADCYAP1R1P41586 468 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 USP14P54578 494 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 RAB3GAP1Q15042 981 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 TJAP1Q5JTD0 557 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 MIER1Q8N108 512 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 BTBD7Q9P203 1132 aa16.19■□□□□ 0.18
TUBB3-207ENST00000554927 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
TUBB3-207ENST00000554927 TRIM43BA6NCK2 446 aa16.18■□□□□ 0.18
TUBB3-207ENST00000554927 VCAM1P19320 739 aa16.18■□□□□ 0.18
TUBB3-207ENST00000554927 TRIM43Q96BQ3 446 aaPredicted RBP16.18■□□□□ 0.18
TUBB3-207ENST00000554927 C12orf42Q96LP6 360 aa16.18■□□□□ 0.18
TUBB3-207ENST00000554927 EYSQ5T1H1 3165 aa16.18■□□□□ 0.18
TUBB3-207ENST00000554927 SIPA1L1O43166 1804 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 TMEM265A0A087WTH1 108 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 GNAI2P04899 355 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 ADORA2AP29274 412 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 PPP4CP60510 307 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 TTC39AQ5SRH9 613 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 ADGRA1Q86SQ6 560 aa16.17■□□□□ 0.18
TUBB3-207ENST00000554927 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-207ENST00000554927 SEPT4O43236 478 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 BCAR3O75815 825 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 TRIM27P14373 513 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 TLE2Q04725 743 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
TUBB3-207ENST00000554927 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 OLFML2BQ68BL8 750 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
TUBB3-207ENST00000554927 SPDYE16A6NNV3 312 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-207ENST00000554927 USP5P45974 858 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
TUBB3-207ENST00000554927 GRIN2CQ14957 1233 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 SNX17Q15036 470 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 LRRC41Q15345 812 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 ABCB5Q2M3G0 1257 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 CERKLQ49MI3 558 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-207ENST00000554927 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 PRUNE2Q8WUY3 3088 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 PPM1EQ8WY54 764 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 SLC5A4Q9NY91 659 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 TACC3Q9Y6A5 838 aa16.15■□□□□ 0.18
TUBB3-207ENST00000554927 CLTBP09497 229 aa16.14■□□□□ 0.17
TUBB3-207ENST00000554927 RAG1P15918 1043 aa16.14■□□□□ 0.17
TUBB3-207ENST00000554927 MTX1Q13505 466 aa16.14■□□□□ 0.17
TUBB3-207ENST00000554927 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.17
TUBB3-207ENST00000554927 MOV10L1Q9BXT6 1211 aaKnown RBP16.14■□□□□ 0.17
TUBB3-207ENST00000554927 RAPGEFL1Q9UHV5 662 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms