RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 H3BS24 57 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 TSPAN15O95858 294 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 CAP2P40123 477 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 XPCQ01831 940 aaPredicted RBP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 ZP2Q05996 745 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 TAF1CQ15572 869 aaPredicted RBP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 ANGEL2Q5VTE6 544 aaKnown RBP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 SLC23A3Q6PIS1 610 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 TMC4Q7Z404 712 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 KCT2Q8NC54 265 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 FLAD1Q8NFF5 587 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 ASB11Q8WXH4 323 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 MRRFQ96E11 262 aaKnown RBP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 TPX2Q9ULW0 747 aaKnown RBP2.53□□□□□ -2.01
PRPF39-208ENST00000554785 MAPK8IP1Q9UQF2 711 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 CAPN6Q9Y6Q1 641 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 BICRAQ9NZM4 1560 aa2.53□□□□□ -2.01
PRPF39-208ENST00000554785 ZNF503-AS2A6NEH8 195 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 GNAT3A8MTJ3 354 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 CBX7O95931 251 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 F13A1P00488 732 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 CST3P01034 146 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-208ENST00000554785 PGRP06401 933 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 RANGAP1P46060 587 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-208ENST00000554785 TNK2Q07912 1038 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 IKZF1Q13422 519 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 SFRP5Q5T4F7 317 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 ANKLE2Q86XL3 938 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 MRPL41Q8IXM3 137 aaKnown RBP2.52□□□□□ -2.01
PRPF39-208ENST00000554785 MFSD4AQ8N468 514 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 MFSD2AQ8NA29 543 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 PPP1R13LQ8WUF5 828 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 TMEM87BQ96K49 555 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 Q96M66 194 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 MIR1-1HGQ9H1L0 117 aa2.52□□□□□ -2.01
PRPF39-208ENST00000554785 CARS2Q9HA77 564 aaKnown RBP2.52□□□□□ -2.01
PRPF39-208ENST00000554785 DNAJA2O60884 412 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 PF4P02776 101 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 ITGAEP38570 1179 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 CLCN7P51798 805 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 RPL6Q02878 288 aaKnown RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 FAM160A1Q05DH4 1040 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 CAMK2GQ13555 558 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 ZNF124Q15973 351 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 TSNAXIP1Q2TAA8 658 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 MCATQ8IVS2 390 aaKnown RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 DNAJB8Q8NHS0 232 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 FBXO27Q8NI29 283 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 RHOVQ96L33 236 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 NOC4LQ9BVI4 516 aaKnown RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 MRS2Q9HD23 443 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 COPRSQ9NQ92 184 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 KIAA1522Q9P206 1035 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 CTNND2Q9UQB3 1225 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 MINDY4BA8MYZ0 360 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 FAM155AB1AL88 458 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 GRIN3BO60391 1043 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 LRRN2O75325 713 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 CILPO75339 1184 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 VAMP1P23763 118 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 ST13P50502 369 aaKnown RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 MESP2Q0VG99 397 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 C22orf34Q6ZV56 151 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 AMIGO3Q86WK7 504 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 UBE2FQ969M7 185 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 CCDC120Q96HB5 630 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 KCNK12Q9HB15 430 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 ZSWIM5Q9P217 1185 aa2.51□□□□□ -2.01
PRPF39-208ENST00000554785 POLR3KQ9Y2Y1 108 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-208ENST00000554785 DNAJC25-GNG10A0A024R161 153 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 CHURC1-FNTBB4DL54 471 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 SORBS3O60504 671 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 ESR1P03372 595 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 LMNB1P20700 586 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 GARTP22102 1010 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 ERVFC1P60507 584 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 MRPL58Q14197 206 aaKnown RBP2.5□□□□□ -2.01
PRPF39-208ENST00000554785 RALGPS1Q5JS13 557 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 GATAD2BQ8WXI9 593 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 LIN37Q96GY3 246 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-208ENST00000554785 CRELD1Q96HD1 420 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 TMEM74Q96NL1 305 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 DUSP15Q9H1R2 295 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-208ENST00000554785 VTI1BQ9UEU0 232 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 SCRIBQ14160 1630 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 EIF4G1Q04637 1599 aaKnown RBP2.5□□□□□ -2.01
PRPF39-208ENST00000554785 LRRC10BA6NIK2 292 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 PLCG1P19174 1290 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 GBP2P32456 591 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-208ENST00000554785 AFMP43652 599 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 LMNB2Q03252 620 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 LDLRAD1Q5T700 205 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 SLC6A19Q695T7 634 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 FBXL19Q6PCT2 694 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 TTLL10Q6ZVT0 673 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 ZSWIM9Q86XI8 627 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 GOLM1Q8NBJ4 401 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 KBTBD4Q9NVX7 518 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms