RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 SEMA3FQ13275 785 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 PUM3Q15397 648 aaKnown RBP7.08□□□□□ -1.28
ATXN3-230ENST00000554673 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 ANKRD18AQ8IVF6 992 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 FAM177A1Q8N128 213 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-230ENST00000554673 LPIN2Q92539 896 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 EVI5LQ96CN4 794 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 CRAMP1Q96RY5 1269 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 NYXQ9GZU5 481 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 PAG1Q9NWQ8 432 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 PCDHAC2Q9Y5I4 1007 aa7.08□□□□□ -1.28
ATXN3-230ENST00000554673 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 ERC2O15083 957 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 PRKAB2O43741 272 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 ZBTB7AO95365 584 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 IFIT1P09914 478 aaKnown RBP7.07□□□□□ -1.28
ATXN3-230ENST00000554673 PDE6AP16499 860 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 C15orf52Q6ZUT6 534 aaKnown RBP7.07□□□□□ -1.28
ATXN3-230ENST00000554673 TDRD7Q8NHU6 1098 aaKnown RBP7.07□□□□□ -1.28
ATXN3-230ENST00000554673 TBC1D16Q8TBP0 767 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 MAP4K1Q92918 833 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 NLRP3Q96P20 1036 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 BRIP1Q9BX63 1249 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 INCENPQ9NQS7 918 aa7.07□□□□□ -1.28
ATXN3-230ENST00000554673 SOWAHDA6NJG2 315 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 SLC27A2O14975 620 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 UPP2O95045 317 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 DPEP1P16444 411 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 PRDX5P30044 214 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 ANTXR2P58335 489 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 DYNLL1P63167 89 aaKnown RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 MTMR2Q13614 643 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 R3HDM1Q15032 1099 aaKnown RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 NLGN1Q8N2Q7 840 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 CHAMP1Q96JM3 812 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 IPO9Q96P70 1041 aaKnown RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 RIOK1Q9BRS2 568 aaKnown RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 STK32BQ9NY57 414 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 HDAC5Q9UQL6 1122 aa7.06□□□□□ -1.28
ATXN3-230ENST00000554673 RBM8AQ9Y5S9 174 aaKnown RBP7.06□□□□□ -1.28
ATXN3-230ENST00000554673 PAPPA2Q9BXP8 1791 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 YDJCA8MPS7 323 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 RNF113AO15541 343 aaKnown RBP7.05□□□□□ -1.28
ATXN3-230ENST00000554673 CYP21A2P08686 494 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 TCF3P15923 654 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 IGHMBP2P38935 993 aaKnown RBP7.05□□□□□ -1.28
ATXN3-230ENST00000554673 BAG6P46379 1132 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 TAF7LQ5H9L4 462 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 RUFY3Q7L099 469 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 CCDC125Q86Z20 511 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 TBC1D10CQ8IV04 446 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 CNTROBQ8N137 903 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 LCORLQ8N3X6 602 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 MPNDQ8N594 471 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 NLGN2Q8NFZ4 835 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 FOXJ1Q92949 421 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 TCEANC2Q96MN5 208 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 CDC5LQ99459 802 aaKnown RBP7.05□□□□□ -1.28
ATXN3-230ENST00000554673 FSD1Q9BTV5 496 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 UPF3BQ9BZI7 483 aaKnown RBP7.05□□□□□ -1.28
ATXN3-230ENST00000554673 NOVA2Q9UNW9 492 aaKnown RBP7.05□□□□□ -1.28
ATXN3-230ENST00000554673 ATP6V0A2Q9Y487 856 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 MYH8P13535 1937 aa7.05□□□□□ -1.28
ATXN3-230ENST00000554673 ZNF532Q9HCE3 1301 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 POLR2AP24928 1970 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 CYP2D7A0A087X1C5 515 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 GSG1L2A8MUP6 293 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 RNF225M0QZC1 329 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 HSPD1P10809 573 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 SLC5A1P13866 664 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 VAMP1P23763 118 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 FKBP4Q02790 459 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 AGERQ15109 404 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 TTC39AQ5SRH9 613 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 CREB3L3Q68CJ9 461 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 PRPF40BQ6NWY9 871 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 C2CD5Q86YS7 1000 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 SP8Q8IXZ3 490 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 SNX21Q969T3 373 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 MPHOSPH8Q99549 860 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 MKRN1Q9UHC7 482 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
ATXN3-230ENST00000554673 GOLGB1Q14789 3259 aaKnown RBP7.04□□□□□ -1.28
ATXN3-230ENST00000554673 XDHP47989 1333 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 MYH6P13533 1939 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 SHTN1A0MZ66 631 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 PIK3CDO00329 1044 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 UFL1O94874 794 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NR3C2P08235 984 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms