RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 DNAJC25Q9H1X3 360 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 PHAXQ9H814 394 aaKnown RBP3.02□□□□□ -1.93
PRPF39-207ENST00000554439 CBX8Q9HC52 389 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 SLC52A1Q9NWF4 448 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 DACT1Q9NYF0 836 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 CTNNA3Q9UI47 895 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-207ENST00000554439 TAF6LQ9Y6J9 622 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 AATKQ6ZMQ8 1374 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 MLH3Q9UHC1 1453 aa3.02□□□□□ -1.93
PRPF39-207ENST00000554439 SSH2Q76I76 1423 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 VGLL3A8MV65 326 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 NPHP1O15259 732 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 GTF2E1P29083 439 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TXLNAP40222 546 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 GJA8P48165 433 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 CENPCQ03188 943 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.01□□□□□ -1.932e-18■■■■■ 41.1
PRPF39-207ENST00000554439 MEI1Q5TIA1 1274 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 EGFLAMQ63HQ2 1017 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ZSCAN25Q6NSZ9 544 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 RHPN1Q8TCX5 695 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 GPR152Q8TDT2 470 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 CACTINQ8WUQ7 758 aaKnown RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 SYTL4Q96C24 671 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 FRMD6Q96NE9 622 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 STK31Q9BXU1 1019 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TRIM5Q9C035 493 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 PDRG1Q9NUG6 133 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TPCN1Q9ULQ1 816 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 INPP5FQ9Y2H2 1132 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 CNTNAP5Q8WYK1 1306 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 PRR36Q9H6K5 1346 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 PEAK1Q9H792 1746 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ANKRD62A6NC57 917 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 GOLGA6L6A8MZA4 724 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 SRGAP3O43295 1099 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ANXA1P04083 346 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 GNAI3P08754 354 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 NBPF7P0C2Y1 421 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 SLFN14P0C7P3 912 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 UBTFL1P0CB47 393 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF75DP51815 510 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 STK3Q13188 491 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 MAP3K11Q16584 847 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TPD52L1Q16890 204 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF654Q8IZM8 581 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 EPS8L3Q8TE67 593 aaKnown RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 DDX11Q96FC9 970 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 NUP62CLQ9H1M0 184 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TNMDQ9H2S6 317 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 C12orf49Q9H741 205 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TRMT1Q9NXH9 659 aaKnown RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 OGFRQ9NZT2 677 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 DMGDHQ9UI17 866 aaKnown RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 METP08581 1390 aa3.01□□□□□ -1.93
PRPF39-207ENST00000554439 XRN1Q8IZH2 1706 aaKnown RBP3.01□□□□□ -1.93
PRPF39-207ENST00000554439 ERICH4A6NGS2 130 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 SMTNL1A8MU46 457 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 ADAMTS2O95450 1211 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 ADH1AP07327 375 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CEBPZQ03701 1054 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 ARID5AQ03989 594 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CBLBQ13191 982 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 LARP1BQ659C4 914 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 Q6ZVU0 165 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 HS2ST1Q7LGA3 356 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 ERMP1Q7Z2K6 904 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 PLA2G4DQ86XP0 818 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CNTROBQ8N137 903 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 KIF18AQ8NI77 898 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 SSH3Q8TE77 659 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 ERCC4Q92889 916 aaPredicted RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 FAM227BQ96M60 508 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 KLF16Q9BXK1 252 aaPredicted RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 TMEM51Q9NW97 253 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CLIP2Q9UDT6 1046 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 FOXD3Q9UJU5 478 aaPredicted RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF232Q9UNY5 417 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 PA2G4Q9UQ80 394 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 ATP6V1DQ9Y5K8 247 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 DIP2CQ9Y2E4 1556 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 TNFRSF21O75509 655 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 UPP2O95045 317 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 ATF4P18848 351 aaPredicted RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 EIF2S2P20042 333 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 EIF4BP23588 611 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF165P49910 485 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 KRT85P78386 507 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 GNL2Q13823 731 aaKnown RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 ELF2Q15723 593 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 VPS53Q5VIR6 699 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 C1orf53Q5VUE5 145 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CCDC30Q5VVM6 783 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 CEP135Q66GS9 1140 aa3□□□□□ -1.93
PRPF39-207ENST00000554439 C11orf57Q6ZUT1 292 aaPredicted RBP3□□□□□ -1.93
PRPF39-207ENST00000554439 LRRN4CLQ8ND94 238 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms