RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SMNDC1O75940 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
KTN1-213ENST00000554306 ZNF853P0CG23 659 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 PCSK2P16519 638 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
KTN1-213ENST00000554306 PRSS36Q5K4E3 855 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 TSR2Q969E8 191 aaKnown RBP8.59□□□□□ -1.03
KTN1-213ENST00000554306 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
KTN1-213ENST00000554306 MRC1P22897 1456 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 KIF4AO95239 1232 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 NOS3P29474 1203 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
KTN1-213ENST00000554306 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 TRMT2AQ8IZ69 625 aaKnown RBP8.58□□□□□ -1.04
KTN1-213ENST00000554306 TMEM130Q8N3G9 435 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 ELP3Q9H9T3 547 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 NHSQ6T4R5 1651 aa8.58□□□□□ -1.04
KTN1-213ENST00000554306 BCL9O00512 1426 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 RGS12O14924 1447 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 TMEM88BA6NKF7 163 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
KTN1-213ENST00000554306 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 CEP135Q66GS9 1140 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 ZNF790Q6PG37 636 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 PIGBQ92521 554 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
KTN1-213ENST00000554306 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 CHMP4AQ9BY43 222 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 AKTIPQ9H8T0 292 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 BTAF1O14981 1849 aa8.57□□□□□ -1.04
KTN1-213ENST00000554306 PAPPAQ13219 1627 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 CT47B1P0C2W7 299 aaPredicted RBP8.56□□□□□ -1.04
KTN1-213ENST00000554306 SSFA2P28290 1259 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 ATP11AP98196 1134 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 SETDB1Q15047 1291 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
KTN1-213ENST00000554306 XKR5Q6UX68 686 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 ATCAYQ86WG3 371 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 NCAPG2Q86XI2 1143 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 TTC16Q8NEE8 873 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 ARID3AQ99856 593 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 UBR2Q8IWV8 1755 aa8.56□□□□□ -1.04
KTN1-213ENST00000554306 SOS1Q07889 1333 aaPredicted RBP8.55□□□□□ -1.04
KTN1-213ENST00000554306 ELL2O00472 640 aaPredicted RBP8.55□□□□□ -1.04
KTN1-213ENST00000554306 KCNQ3O43525 872 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 KCNQ2O43526 872 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
KTN1-213ENST00000554306 TWISTNBQ3B726 338 aaPredicted RBP8.55□□□□□ -1.04
KTN1-213ENST00000554306 ALKBH2Q6NS38 261 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 EDEM1Q92611 657 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 RASSF4Q9H2L5 321 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 ATG3Q9NT62 314 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 TMEM63CQ9P1W3 806 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 MTMR7Q9Y216 660 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
KTN1-213ENST00000554306 SCO2A0A1W2PP80 73 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 TRIM37O94972 964 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 HOXB7P09629 217 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 CDC27P30260 824 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 CEP120Q8N960 986 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 C8orf58Q8NAV2 365 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 GTF3C2Q8WUA4 911 aaPredicted RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 MEGF10Q96KG7 1140 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
KTN1-213ENST00000554306 PBX4Q9BYU1 374 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
KTN1-213ENST00000554306 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
KTN1-213ENST00000554306 VAMP4O75379 141 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 PDGFAP04085 211 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
KTN1-213ENST00000554306 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
KTN1-213ENST00000554306 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 DZIP1LQ8IYY4 767 aaKnown RBP8.53□□□□□ -1.04
KTN1-213ENST00000554306 TSPYL6Q8N831 410 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
KTN1-213ENST00000554306 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
KTN1-213ENST00000554306 LY75O60449 1722 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 LINC01387J3KSC0 135 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 STARD3NLO95772 234 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 EIF2S2P20042 333 aaKnown RBP8.52□□□□□ -1.05
KTN1-213ENST00000554306 MPSTP25325 297 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 EIF1AXP47813 144 aaKnown RBP8.52□□□□□ -1.05
KTN1-213ENST00000554306 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
KTN1-213ENST00000554306 FOXD4L6Q3SYB3 417 aaPredicted RBP8.52□□□□□ -1.05
KTN1-213ENST00000554306 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms