RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 RCAN1P53805 252 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 SEC23AQ15436 765 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 TMEM179Q6ZVK1 233 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 KANSL2Q9H9L4 492 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 KIF3AQ9Y496 699 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
TMEM55B-205ENST00000554028 BAZ2AQ9UIF9 1905 aaKnown RBP12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 CDKL5O76039 1030 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 DDAH1O94760 285 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 TTLL1O95922 423 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 YY1P25490 414 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 KIF5BP33176 963 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 KRT26Q7Z3Y9 468 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 MICU3Q86XE3 530 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 GTF3C6Q969F1 213 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 TEPSINQ96N21 525 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 ZNF341Q9BYN7 854 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 MTMR4Q9NYA4 1195 aa12.22□□□□□ -0.45
TMEM55B-205ENST00000554028 NMT2O60551 498 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 NBPF12Q5TAG4 269 aaPredicted RBP12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 CDC37L1Q7L3B6 337 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 CEP95Q96GE4 821 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 DNAJC18Q9H819 358 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 RRAGCQ9HB90 399 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 RBM28Q9NW13 759 aaKnown RBP12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 SCAF8Q9UPN6 1271 aaKnown RBP12.21□□□□□ -0.45
TMEM55B-205ENST00000554028 LAMB1P07942 1786 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 PLIN4Q96Q06 1357 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 MYH1P12882 1939 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 PPP1R12BO60237 982 aaPredicted RBP12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 GDF11O95390 407 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 LARGE1O95461 756 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 GH2P01242 217 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 ASNSP08243 561 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 CAP2P40123 477 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 GNAQP50148 359 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 SCRN1Q12765 414 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 RTN1Q16799 776 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 ARHGEF10LQ9HCE6 1279 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 NYAP2Q9P242 653 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
TMEM55B-205ENST00000554028 FOCADQ5VW36 1801 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 IGKV6D-41A0A0C4DH26 115 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 PDCP20941 246 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 ICA1Q05084 483 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 SEPT2Q15019 361 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 CCDC144CPQ8IYA2 1237 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 PICK1Q9NRD5 415 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 CHMP5Q9NZZ3 219 aa12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 DDX60LQ5H9U9 1706 aaKnown RBP12.19□□□□□ -0.46
TMEM55B-205ENST00000554028 POTECB2RU33 542 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 NOVP48745 357 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 PRAMEF18Q5VWM3 479 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 MKL1Q969V6 931 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 LZTS2Q9BRK4 669 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 ZBTB21Q9ULJ3 1066 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms