RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZGLP1P0C6A0 271 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 CYP7A1P22680 504 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 GRK4P32298 578 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 ETF1P62495 437 aaKnown RBP4.9□□□□□ -1.63
SRP54-204ENST00000553923 FMR1Q06787 632 aaKnown RBP eCLIP4.9□□□□□ -1.63
SRP54-204ENST00000553923 TIGD5Q53EQ6 642 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 WIPI1Q5MNZ9 446 aaPredicted RBP4.9□□□□□ -1.63
SRP54-204ENST00000553923 MRPL41Q8IXM3 137 aaKnown RBP4.9□□□□□ -1.63
SRP54-204ENST00000553923 DNAJB8Q8NHS0 232 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 BAHD1Q8TBE0 780 aaPredicted RBP4.9□□□□□ -1.63
SRP54-204ENST00000553923 RELTQ969Z4 430 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 KCNC2Q96PR1 638 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 GCM1Q9NP62 436 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 WWC3Q9ULE0 1092 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 TACC3Q9Y6A5 838 aa4.9□□□□□ -1.63
SRP54-204ENST00000553923 ADAMTS20P59510 1910 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 A0A0G2JLL6 359 aaPredicted RBP4.89□□□□□ -1.63
SRP54-204ENST00000553923 PEX10O60683 326 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 TPP2P29144 1249 aaPredicted RBP4.89□□□□□ -1.63
SRP54-204ENST00000553923 DLG4P78352 724 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 SV2BQ7L1I2 683 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 IRF2BP1Q8IU81 584 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 CREG2Q8IUH2 290 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 PDZD8Q8NEN9 1154 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 C19orf44Q9H6X5 657 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 C12orf49Q9H741 205 aa4.89□□□□□ -1.63
SRP54-204ENST00000553923 NR0B2Q15466 257 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 PPP1R13LQ8WUF5 828 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 GPR62Q9BZJ7 368 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 ZNF552Q9H707 407 aaPredicted RBP4.88□□□□□ -1.63
SRP54-204ENST00000553923 FAM8A1Q9UBU6 413 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 GNEQ9Y223 722 aaKnown RBP4.88□□□□□ -1.63
SRP54-204ENST00000553923 PCDHB5Q9Y5E4 795 aa4.88□□□□□ -1.63
SRP54-204ENST00000553923 FOXD2O60548 495 aaPredicted RBP4.87□□□□□ -1.63
SRP54-204ENST00000553923 SEMA7AO75326 666 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 KRTAP10-2P60368 255 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 RPS26P62854 115 aaKnown RBP4.87□□□□□ -1.63
SRP54-204ENST00000553923 SLC6A19Q695T7 634 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 TTBK2Q6IQ55 1244 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 MARCH10Q8NA82 808 aaPredicted RBP4.87□□□□□ -1.63
SRP54-204ENST00000553923 SHISA4Q96DD7 197 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 DPH2Q9BQC3 489 aaPredicted RBP4.87□□□□□ -1.63
SRP54-204ENST00000553923 EBF1Q9UH73 591 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 CEP131Q9UPN4 1083 aa4.87□□□□□ -1.63
SRP54-204ENST00000553923 TEX51A0A1B0GUA7 166 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 USP17L7P0C7H9 530 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 BMP7P18075 431 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 MAPK1P28482 360 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 ALG1LQ6GMV1 187 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 TSPYL5Q86VY4 417 aaPredicted RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 MCATQ8IVS2 390 aaKnown RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 INTS4Q96HW7 963 aaKnown RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 TMEM87BQ96K49 555 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 SLC6A17Q9H1V8 727 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 CWC22Q9HCG8 908 aaKnown RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 BIN2Q9UBW5 565 aaPredicted RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
SRP54-204ENST00000553923 ZNF281Q9Y2X9 895 aa4.86□□□□□ -1.63
SRP54-204ENST00000553923 FITM1A5D6W6 292 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 PGRP06401 933 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 ETV3P41162 512 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 MAPK8P45983 427 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 EGR3Q06889 387 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 SEPT6Q14141 434 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 ZNF605Q86T29 641 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 OXR1Q8N573 874 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 DTWD2Q8NBA8 298 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 RETREG2Q8NC44 543 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 ACSF2Q96CM8 615 aaPredicted RBP4.85□□□□□ -1.63
SRP54-204ENST00000553923 TRIT1Q9H3H1 467 aaKnown RBP4.85□□□□□ -1.63
SRP54-204ENST00000553923 ZCCHC4Q9H5U6 513 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 DUSP13Q9UII6 198 aa4.85□□□□□ -1.63
SRP54-204ENST00000553923 NOTOA8MTQ0 251 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 TRIM13O60858 407 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 EFEMP2O95967 443 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 AGMOQ6ZNB7 445 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 SGPP1Q9BX95 441 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 GPATCH2Q9NW75 528 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 SPG7Q9UQ90 795 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 KCTD3Q9Y597 815 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 PCDHA11Q9Y5I1 949 aa4.84□□□□□ -1.63
SRP54-204ENST00000553923 SNX17Q15036 470 aa4.83□□□□□ -1.64
SRP54-204ENST00000553923 LINC01599Q8WXQ3 324 aa4.83□□□□□ -1.64
SRP54-204ENST00000553923 XYLT2Q9H1B5 865 aa4.83□□□□□ -1.64
SRP54-204ENST00000553923 RTEL1Q9NZ71 1219 aa4.83□□□□□ -1.64
SRP54-204ENST00000553923 ADAM30Q9UKF2 790 aa4.83□□□□□ -1.64
SRP54-204ENST00000553923 CNOT6Q9ULM6 557 aaKnown RBP4.83□□□□□ -1.64
SRP54-204ENST00000553923 PSPNO60542 156 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 LRRN2O75325 713 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 TEKQ02763 1124 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 SSPNQ14714 243 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 ZNF385BQ569K4 471 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 TCERG1LQ5VWI1 586 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 CXorf38Q8TB03 319 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 PANK1Q8TE04 598 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 ASB16Q96NS5 453 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 G6PC3Q9BUM1 346 aa4.82□□□□□ -1.64
SRP54-204ENST00000553923 TTF2Q9UNY4 1162 aaKnown RBP4.82□□□□□ -1.64
SRP54-204ENST00000553923 GTF3C3Q9Y5Q9 886 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms