RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 DAGLBQ8NCG7 672 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 CCDC150Q8NCX0 1101 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 CTCFLQ8NI51 663 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-209ENST00000553889 CACTINQ8WUQ7 758 aaKnown RBP10.59□□□□□ -0.71
PRKCH-209ENST00000553889 SHISA4Q96DD7 197 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 CCDC34Q96HJ3 373 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 LZTS2Q9BRK4 669 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 ZKSCAN3Q9BRR0 538 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 HSD3B7Q9H2F3 369 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
PRKCH-209ENST00000553889 TRPC5Q9UL62 973 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-209ENST00000553889 FAM205AQ6ZU69 1335 aa10.58□□□□□ -0.71
PRKCH-209ENST00000553889 C10orf71Q711Q0 1435 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 GPR75-ASB3A0A0A6YYF3 556 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 GYS1P13807 737 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ERCC5P28715 1186 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ATP2C1P98194 919 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 MORC3Q14149 939 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 SYCP1Q15431 976 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 LONRF3Q496Y0 759 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 FOXP4Q8IVH2 680 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 DRC7Q8IY82 874 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 CLIC6Q96NY7 704 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ZNF287Q9HBT7 754 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 ANO8Q9HCE9 1232 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 KCNJ14Q9UNX9 436 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 DDX60LQ5H9U9 1706 aaKnown RBP10.58□□□□□ -0.72
PRKCH-209ENST00000553889 GAKO14976 1311 aa10.58□□□□□ -0.72
PRKCH-209ENST00000553889 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 KIF2AO00139 706 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-209ENST00000553889 SLFN14P0C7P3 912 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 SCG2P13521 617 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 KCNQ4P56696 695 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 NR5A1Q13285 461 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 GRM4Q14833 912 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 POSTNQ15063 836 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
PRKCH-209ENST00000553889 SRBD1Q8N5C6 995 aaKnown RBP10.57□□□□□ -0.72
PRKCH-209ENST00000553889 CNNM3Q8NE01 707 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 ENOX1Q8TC92 643 aaKnown RBP10.57□□□□□ -0.72
PRKCH-209ENST00000553889 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 CABP5Q9NP86 173 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 LRRC4BQ9NT99 713 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 PCDHB6Q9Y5E3 794 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 PCDHA5Q9Y5H7 936 aa10.57□□□□□ -0.72
PRKCH-209ENST00000553889 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 CYP2D7A0A087X1C5 515 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 CTIFO43310 598 aaKnown RBP10.56□□□□□ -0.72
PRKCH-209ENST00000553889 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
PRKCH-209ENST00000553889 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 UQCRHP07919 91 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 ZNF18P17022 549 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 ST5P78524 1137 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 CCZ1BP86790 482 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 CCZ1P86791 482 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-209ENST00000553889 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-209ENST00000553889 OLFM4Q6UX06 510 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 RTFDC1Q9BY42 306 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-209ENST00000553889 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 MCM9Q9NXL9 1143 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 PAXBP1Q9Y5B6 917 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 AFF2P51816 1311 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 MYO3BQ8WXR4 1341 aa10.56□□□□□ -0.72
PRKCH-209ENST00000553889 NRXN2Q9P2S2 1712 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 M0R2N6 131 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 SMC2O95347 1197 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 SERPINB2P05120 415 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 FANCCQ00597 558 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 CHAF1AQ13111 956 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 PNOCQ13519 176 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 NYAP1Q6ZVC0 841 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 C16orf86Q6ZW13 317 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 SP8Q8IXZ3 490 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 CCDC112Q8NEF3 446 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms