RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 IL17RBQ9NRM6 502 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 LIMCH1Q9UPQ0 1083 aa11.46□□□□□ -0.57
CHD8-204ENST00000553622 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 PPP1R12BO60237 982 aaPredicted RBP11.45□□□□□ -0.58
CHD8-204ENST00000553622 HSP90AA1P07900 732 aaKnown RBP11.45□□□□□ -0.58
CHD8-204ENST00000553622 INPP5BP32019 993 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 CAP2P40123 477 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 ICA1Q05084 483 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 FMR1Q06787 632 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD8-204ENST00000553622 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 SNX21Q969T3 373 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 MYL10Q9BUA6 226 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 KAT14Q9H8E8 782 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
CHD8-204ENST00000553622 ZBTB21Q9ULJ3 1066 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 SLC12A7Q9Y666 1083 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 PAPPA2Q9BXP8 1791 aa11.45□□□□□ -0.58
CHD8-204ENST00000553622 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 TTLL1O95922 423 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 RXRAP19793 462 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 JAG1P78504 1218 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 MAP3K10Q02779 954 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 SEC23AQ15436 765 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 MOB2Q70IA6 237 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 CCDC144CPQ8IYA2 1237 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 LRRC47Q8N1G4 583 aaKnown RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 MTA3Q9BTC8 594 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD8-204ENST00000553622 ALDH8A1Q9H2A2 487 aaPredicted RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 SLKQ9H2G2 1235 aaPredicted RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 TCP11L1Q9NUJ3 509 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 MTMR4Q9NYA4 1195 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 CLIP2Q9UDT6 1046 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
CHD8-204ENST00000553622 PTPRFP10586 1907 aa11.44□□□□□ -0.58
CHD8-204ENST00000553622 ZBTB43O43298 467 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 USP2O75604 605 aaPredicted RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 CELF2O95319 508 aaKnown RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 LARGE1O95461 756 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 ASNSP08243 561 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 LIFRP42702 1097 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 CCT2P78371 535 aaKnown RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 ARMC9Q7Z3E5 817 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 ZNF654Q8IZM8 581 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 NECAB1Q8N987 351 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 KLRG1Q96E93 195 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
CHD8-204ENST00000553622 FEZ1Q99689 392 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 CSADQ9Y600 493 aa11.43□□□□□ -0.58
CHD8-204ENST00000553622 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 GOLGA8AA7E2F4 631 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 METAP2P50579 478 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHD8-204ENST00000553622 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 ZYXQ15942 572 aaKnown RBP11.42□□□□□ -0.58
CHD8-204ENST00000553622 ME3Q16798 604 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 RCSD1Q6JBY9 416 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 APOA5Q6Q788 366 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 CCDC83Q8IWF9 413 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 SCYL3Q8IZE3 742 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 AGXT2Q9BYV1 514 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
CHD8-204ENST00000553622 ZNF112Q9UJU3 913 aa11.42□□□□□ -0.58
CHD8-204ENST00000553622 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 UBE2Q2LH0YL09 131 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 KIF3CO14782 793 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 PDIA3P30101 505 aaKnown RBP11.41□□□□□ -0.58
CHD8-204ENST00000553622 VGLL4Q14135 290 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 RTN1Q16799 776 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 C2orf69Q8N8R5 385 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms