RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
APEX1-205ENST00000553555 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
APEX1-205ENST00000553555 SCN4AP35499 1836 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 GLTPD2A6NH11 291 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 JAK2O60674 1132 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 MAP3K10Q02779 954 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 TROAPQ12815 778 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
APEX1-205ENST00000553555 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
APEX1-205ENST00000553555 CCDC144CPQ8IYA2 1237 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
APEX1-205ENST00000553555 DDAH1O94760 285 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 CALM1P0DP23 149 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 CALM2P0DP24 149 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 CALM3P0DP25 149 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 NUCB2P80303 420 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 PTPDC1A2A3K4 754 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
APEX1-205ENST00000553555 CPLX1O14810 134 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
APEX1-205ENST00000553555 NTRK3Q16288 839 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 RTN1Q16799 776 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 PNMA1Q8ND90 353 aa16.05■□□□□ 0.16
APEX1-205ENST00000553555 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
APEX1-205ENST00000553555 CCDC196A0A1B0GTZ2 297 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
APEX1-205ENST00000553555 PKP1Q13835 747 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
APEX1-205ENST00000553555 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
APEX1-205ENST00000553555 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
APEX1-205ENST00000553555 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 CDKL5O76039 1030 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
APEX1-205ENST00000553555 SYT1P21579 422 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 ZDHHC9Q9Y397 364 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 PITPNM2Q9BZ72 1349 aa16.03■□□□□ 0.16
APEX1-205ENST00000553555 WDR90Q96KV7 1748 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 GDF11O95390 407 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 TTLL1O95922 423 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 IFNAR1P17181 557 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 JAG1P78504 1218 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 SHROOM1Q2M3G4 852 aaPredicted RBP16.02■□□□□ 0.16
APEX1-205ENST00000553555 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.16
APEX1-205ENST00000553555 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 KANSL2Q9H9L4 492 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 RBM28Q9NW13 759 aaKnown RBP16.02■□□□□ 0.16
APEX1-205ENST00000553555 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
APEX1-205ENST00000553555 STX6O43752 255 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 BRD1O95696 1058 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
APEX1-205ENST00000553555 PDCP20941 246 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 SEPT2Q15019 361 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 NBPF12Q5TAG4 269 aaPredicted RBP16.01■□□□□ 0.15
APEX1-205ENST00000553555 USP50Q70EL3 339 aaPredicted RBP16.01■□□□□ 0.15
APEX1-205ENST00000553555 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
APEX1-205ENST00000553555 NYAP2Q9P242 653 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 PPP2R3BQ9Y5P8 575 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 PPFIA3O75145 1194 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 GH2P01242 217 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 EPHX2P34913 555 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 GRM4Q14833 912 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 CLEC10AQ8IUN9 316 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 MKL1Q969V6 931 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
APEX1-205ENST00000553555 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
APEX1-205ENST00000553555 TCHHQ07283 1943 aa16■□□□□ 0.15
APEX1-205ENST00000553555 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
APEX1-205ENST00000553555 PHF20L1A8MW92 1017 aa16■□□□□ 0.15
APEX1-205ENST00000553555 POTECB2RU33 542 aa16■□□□□ 0.15
APEX1-205ENST00000553555 CAP2P40123 477 aa16■□□□□ 0.15
APEX1-205ENST00000553555 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
APEX1-205ENST00000553555 NBPF11Q86T75 865 aa16■□□□□ 0.15
APEX1-205ENST00000553555 SIAH1Q8IUQ4 282 aa16■□□□□ 0.15
APEX1-205ENST00000553555 PHKBQ93100 1093 aa16■□□□□ 0.15
APEX1-205ENST00000553555 HOOK2Q96ED9 719 aa16■□□□□ 0.15
APEX1-205ENST00000553555 STK36Q9NRP7 1315 aa15.99■□□□□ 0.15
APEX1-205ENST00000553555 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
APEX1-205ENST00000553555 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
APEX1-205ENST00000553555 KIF5BP33176 963 aa15.99■□□□□ 0.15
APEX1-205ENST00000553555 FUT2Q10981 343 aa15.99■□□□□ 0.15
APEX1-205ENST00000553555 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
APEX1-205ENST00000553555 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
APEX1-205ENST00000553555 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
APEX1-205ENST00000553555 DCPSQ96C86 337 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms