RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 HMGCRP04035 888 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 SDR42E1Q8WUS8 393 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 PRO3102Q9H379 93 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 ATP8A2Q9NTI2 1148 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 SGPL1O95470 568 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 MAPK4P31152 587 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 CCAR1Q8IX12 1150 aaKnown RBP18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 HTATIP2Q9BUP3 242 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 ARMT1Q9H993 441 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 MYH8P13535 1937 aa18.25■□□□□ 0.51
SDR39U1-205ENST00000553546 MBD4O95243 580 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 ERVK-24P63145 666 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 NUDT12Q9BQG2 462 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 ECHDC1Q9NTX5 307 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 GJD2Q9UKL4 321 aa18.24■□□□□ 0.51
SDR39U1-205ENST00000553546 CUL9Q8IWT3 2517 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 FARP2O94887 1054 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 VCAM1P19320 739 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 CCNA1P78396 465 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 UBE2Q1Q7Z7E8 422 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 PAGR1Q9BTK6 254 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 DCTPP1Q9H773 170 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 PLXNB2O15031 1838 aa18.23■□□□□ 0.51
SDR39U1-205ENST00000553546 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 SEPT2Q15019 361 aa18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 TRMT44Q8IYL2 757 aaKnown RBP18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 DEFB118Q96PH6 123 aa18.22■□□□□ 0.51
SDR39U1-205ENST00000553546 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 TFRCP02786 760 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 GUCY1A2P33402 732 aa18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 LBX2Q6XYB7 198 aa18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 CWC22Q9HCG8 908 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 HMX1Q9NP08 348 aaPredicted RBP18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 RPTORQ8N122 1335 aa18.21■□□□□ 0.51
SDR39U1-205ENST00000553546 PRKAB2O43741 272 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 PLEKHH3Q7Z736 793 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 DPF3Q92784 378 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 CCDC17Q96LX7 622 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 SH2D4AQ9H788 454 aa18.2■□□□□ 0.5
SDR39U1-205ENST00000553546 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 CYP2D6P10635 497 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 CYP2B6P20813 491 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 RGS2P41220 211 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 Q3C1V9 767 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 GPR142Q7Z601 462 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 TRIB2Q92519 343 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 PORCNQ9H237 461 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 RPAP3Q9H6T3 665 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
SDR39U1-205ENST00000553546 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 USP17L21D6R901 530 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 PEX10O60683 326 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 EVX2Q03828 476 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 KBTBD3Q8NAB2 608 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 LPAR1Q92633 364 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 DYNLL2Q96FJ2 89 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 APBA2Q99767 749 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
SDR39U1-205ENST00000553546 SPDYE16A6NNV3 312 aaPredicted RBP18.17■□□□□ 0.5
SDR39U1-205ENST00000553546 CNMDO75829 334 aa18.17■□□□□ 0.5
SDR39U1-205ENST00000553546 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
SDR39U1-205ENST00000553546 ICA1Q05084 483 aa18.17■□□□□ 0.5
SDR39U1-205ENST00000553546 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms