RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TOB1P50616 345 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 RBM10P98175 930 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 NYAP1Q6ZVC0 841 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 ENAHQ8N8S7 591 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 CRNKL1Q9BZJ0 848 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 BRMS1Q9HCU9 246 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 FBXO2Q9UK22 296 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 PARP3Q9Y6F1 533 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 COL4A1P02462 1669 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 TAF1P21675 1872 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 POLRMTO00411 1230 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 SMC2O95347 1197 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 GUCY1A2P33402 732 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 MDM2Q00987 491 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 PTPN14Q15678 1187 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 SBK1Q52WX2 424 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 SPTY2D1Q68D10 685 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 METTL16Q86W50 562 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 CNBD1Q8NA66 436 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 MLKLQ8NB16 471 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 C16orf45Q96MC5 204 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 ZKSCAN3Q9BRR0 538 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 IFNKQ9P0W0 207 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 ANKRD31Q8N7Z5 1873 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 BIN1O00499 593 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 SERPINB2P05120 415 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 TM4SF1P30408 202 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 FANCCQ00597 558 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 LONRF3Q496Y0 759 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 TPTE2Q6XPS3 522 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 CLIC6Q96NY7 704 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 PYM1Q9BRP8 204 aaKnown RBP14.79□□□□□ -0.04
SHMT2-205ENST00000553474 PHF20Q9BVI0 1012 aa14.79□□□□□ -0.04
SHMT2-205ENST00000553474 POLD1P28340 1107 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 KRT2P35908 639 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 FUT2Q10981 343 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 TROAPQ12815 778 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 POSTNQ15063 836 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 CEP135Q66GS9 1140 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 CCAR2Q8N163 923 aaKnown RBP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 FERMT2Q96AC1 680 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 AATFQ9NY61 560 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 PCDHA5Q9Y5H7 936 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 A0A087WWV3 80 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 TRIM75PA6NK02 468 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 TRAPPC10P48553 1259 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 SARSP49591 514 aaKnown RBP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 PNOCQ13519 176 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 SPATA20Q8TB22 786 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 KCNJ14Q9UNX9 436 aa14.78□□□□□ -0.04
SHMT2-205ENST00000553474 IQSEC3Q9UPP2 1182 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-205ENST00000553474 ST5P78524 1137 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 PDE4BQ07343 736 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 PKN1Q16512 942 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 CCDC178Q5BJE1 867 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 PRR5LQ6MZQ0 368 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 C3orf67Q6ZVT6 689 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 TMC6Q7Z403 805 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 CERS3Q8IU89 383 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 FAM177A1Q8N128 213 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-205ENST00000553474 ANKRD7Q92527 254 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 FBXW7Q969H0 707 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 HSD3B7Q9H2F3 369 aa14.77□□□□□ -0.05
SHMT2-205ENST00000553474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 ERCC5P28715 1186 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 LMOD1P29536 600 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 UBASH3AP57075 661 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 MECOMQ03112 1051 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 TMTC3Q6ZXV5 915 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 FCHSD1Q86WN1 690 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 ENOX1Q8TC92 643 aaKnown RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 SMARCE1Q969G3 411 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
SHMT2-205ENST00000553474 COL11A2P13942 1736 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-205ENST00000553474 SERPINC1P01008 464 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 KIF5BP33176 963 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 NR5A1Q13285 461 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 KIF18AQ8NI77 898 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 ZNF384Q8TF68 577 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 CABP5Q9NP86 173 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-205ENST00000553474 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 USP17L21D6R901 530 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 UBE2Q2LH0YL09 131 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 POLR2DO15514 142 aaKnown RBP14.75□□□□□ -0.05
SHMT2-205ENST00000553474 DYNLL1P63167 89 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 1052.5 ms