RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 DDX60LQ5H9U9 1706 aaKnown RBP19.13■□□□□ 0.65
CDK4-215ENST00000553237 RBBP6Q7Z6E9 1792 aaKnown RBP19.12■□□□□ 0.65
CDK4-215ENST00000553237 USP14P54578 494 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 Q3C1V9 767 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 C12orf60Q5U649 245 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 PRPF38BQ5VTL8 546 aaKnown RBP19.12■□□□□ 0.65
CDK4-215ENST00000553237 GPRC5AQ8NFJ5 357 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 DDRGK1Q96HY6 314 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 C12orf42Q96LP6 360 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 SWAP70Q9UH65 585 aa19.12■□□□□ 0.65
CDK4-215ENST00000553237 USP17L15C9J2P7 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L13C9JLJ4 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L11C9JVI0 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L18D6R9N7 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L22D6RA61 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L17D6RBQ6 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L19D6RCP7 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L20D6RJB6 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 INHAP05111 366 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 USP17L24Q0WX57 530 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 POTEEQ6S8J3 1075 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 PXYLP1Q8TE99 480 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 UNC93B1Q9H1C4 597 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 GJD2Q9UKL4 321 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 DOCK3Q8IZD9 2030 aa19.11■□□□□ 0.65
CDK4-215ENST00000553237 A0A1W2PRG0 241 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 RNF113AO15541 343 aaKnown RBP19.1■□□□□ 0.65
CDK4-215ENST00000553237 AKR1B1P15121 316 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 VCAM1P19320 739 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 CDK8P49336 464 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 CATSPERGQ6ZRH7 1159 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 AMOTL1Q8IY63 956 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 OSBP2Q969R2 916 aa19.1■□□□□ 0.65
CDK4-215ENST00000553237 STRBPQ96SI9 672 aaKnown RBP19.1■□□□□ 0.65
CDK4-215ENST00000553237 GJB1P08034 283 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 ERVK-9P63128 1117 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 ERVK-24P63145 666 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 CTR9Q6PD62 1173 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 TMEM179Q6ZVK1 233 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 CLEC10AQ8IUN9 316 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
CDK4-215ENST00000553237 APPBP2Q92624 585 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 SHISA4Q96DD7 197 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 RPAP3Q9H6T3 665 aaPredicted RBP19.09■□□□□ 0.65
CDK4-215ENST00000553237 BRCA2P51587 3418 aa19.09■□□□□ 0.65
CDK4-215ENST00000553237 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.65
CDK4-215ENST00000553237 TTC41PQ6P2S7 1318 aa19.08■□□□□ 0.65
CDK4-215ENST00000553237 ERC2O15083 957 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 GJA8P48165 433 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 STK11IPQ8N1F8 1099 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 NKX2-3Q8TAU0 364 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 PI4K2BQ8TCG2 481 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
CDK4-215ENST00000553237 PORCNQ9H237 461 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 MYH7P12883 1935 aa19.08■□□□□ 0.64
CDK4-215ENST00000553237 GSG1L2A8MUP6 293 aa19.07■□□□□ 0.64
CDK4-215ENST00000553237 GLRX3O76003 335 aaKnown RBP19.07■□□□□ 0.64
CDK4-215ENST00000553237 CYP2B6P20813 491 aa19.07■□□□□ 0.64
CDK4-215ENST00000553237 C16orf86Q6ZW13 317 aa19.07■□□□□ 0.64
CDK4-215ENST00000553237 U2AF1L4Q8WU68 220 aaKnown RBP19.07■□□□□ 0.64
CDK4-215ENST00000553237 CCDC17Q96LX7 622 aa19.07■□□□□ 0.64
CDK4-215ENST00000553237 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
CDK4-215ENST00000553237 M0R2C6 588 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 GPAA1O43292 621 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 CNMDO75829 334 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 ZFYP08048 801 aaPredicted RBP19.06■□□□□ 0.64
CDK4-215ENST00000553237 MX1P20591 662 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 MAPK4P31152 587 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 ICA1Q05084 483 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 KIAA1755Q5JYT7 1200 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 SIAH1Q8IUQ4 282 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 RABGAP1Q9Y3P9 1069 aa19.06■□□□□ 0.64
CDK4-215ENST00000553237 MKI67P46013 3256 aaKnown RBP19.06■□□□□ 0.64
CDK4-215ENST00000553237 MINDY4BA8MYZ0 360 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 ATP2B2Q01814 1243 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 TRIM32Q13049 653 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 DEFB118Q96PH6 123 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 SEC62Q99442 399 aaKnown RBP19.05■□□□□ 0.64
CDK4-215ENST00000553237 NUDT12Q9BQG2 462 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 FSD1Q9BTV5 496 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 TANGO6Q9C0B7 1094 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 ARHGEF10LQ9HCE6 1279 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 CWC22Q9HCG8 908 aaKnown RBP19.05■□□□□ 0.64
CDK4-215ENST00000553237 BTBD7Q9P203 1132 aa19.05■□□□□ 0.64
CDK4-215ENST00000553237 ARPP21Q9UBL0 812 aaPredicted RBP19.05■□□□□ 0.64
CDK4-215ENST00000553237 SPDYE16A6NNV3 312 aaPredicted RBP19.04■□□□□ 0.64
CDK4-215ENST00000553237 SGPL1O95470 568 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 HMGCRP04035 888 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 APPP05067 770 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
CDK4-215ENST00000553237 SBK1Q52WX2 424 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 WDR78Q5VTH9 848 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 GPR142Q7Z601 462 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 PLEKHH3Q7Z736 793 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 SPICE1Q8N0Z3 855 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 TMX2Q9Y320 296 aa19.04■□□□□ 0.64
CDK4-215ENST00000553237 TFRCP02786 760 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms