RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 IRX3P78415 501 aaPredicted RBP6.52□□□□□ -1.37
CKAP4-203ENST00000553039 MAP3K10Q02779 954 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 TFF2Q03403 129 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 TLE2Q04725 743 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 SPP2Q13103 211 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 CHAF1AQ13111 956 aaPredicted RBP6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PPIGQ13427 754 aaKnown RBP eCLIP6.52□□□□□ -1.37
CKAP4-203ENST00000553039 ADGRE1Q14246 886 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 CCDC57Q2TAC2 916 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 TRIM60Q495X7 471 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 GJC2Q5T442 439 aaPredicted RBP6.52□□□□□ -1.37
CKAP4-203ENST00000553039 CCDC30Q5VVM6 783 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PI4KAP1Q8N8J0 262 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 ZNF280CQ8ND82 737 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 USP6NLQ92738 828 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 HLA-CQ95604 372 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PBXIP1Q96AQ6 731 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 FBXL18Q96ME1 805 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 MYH16Q9H6N6 1097 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PRM3Q9NNZ6 103 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 USP40Q9NVE5 1235 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 CHMP3Q9Y3E7 222 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 ADGRG1Q9Y653 693 aa6.52□□□□□ -1.37
CKAP4-203ENST00000553039 UTYO14607 1347 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 MYO9BQ13459 2157 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 FAM86C2PA6NEL3 165 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 NEURL1BA8MQ27 555 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 MAP3K7O43318 606 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 ENTPD3O75355 529 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 IGKV5-2P06315 115 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 SLC5A1P13866 664 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 HOXA7P31268 230 aaPredicted RBP6.51□□□□□ -1.37
CKAP4-203ENST00000553039 ADCYAP1R1P41586 468 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 KCNQ1P51787 676 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 SNX17Q15036 470 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 MORN1Q5T089 497 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 TREML2Q5T2D2 321 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 GPR142Q7Z601 462 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 SH3RF1Q7Z6J0 888 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 MICALL1Q8N3F8 863 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 TTC13Q8NBP0 860 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 SLC44A5Q8NCS7 719 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 GLMNQ92990 594 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 MFSD14AQ96MC6 490 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 TOX2Q96NM4 488 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 APBA2Q99767 749 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 AS3MTQ9HBK9 375 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 C11orf16Q9NQ32 467 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 TMOD4Q9NZQ9 345 aa6.51□□□□□ -1.37
CKAP4-203ENST00000553039 ZSWIM8A7E2V4 1837 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 COL4A1P02462 1669 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 SLC15A5A6NIM6 579 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 C19orf81C9J6K1 198 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 SPTLC1O15269 473 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 TIMP1P01033 207 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 POU3F3P20264 500 aaPredicted RBP6.5□□□□□ -1.37
CKAP4-203ENST00000553039 CLCN6P51797 869 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 EPHB4P54760 987 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 CCL14Q16627 93 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 CDC42EP5Q6NZY7 148 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 TMEM199Q8N511 208 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 PRRX2Q99811 253 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 OSBPL5Q9H0X9 879 aaPredicted RBP6.5□□□□□ -1.37
CKAP4-203ENST00000553039 SLC5A4Q9NY91 659 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 LIMD1Q9UGP4 676 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 PCDHGA10Q9Y5H3 936 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 IVNS1ABPQ9Y6Y0 642 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
CKAP4-203ENST00000553039 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 ELL2O00472 640 aaPredicted RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 PBX2P40425 430 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 HMGCS2P54868 508 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 GRIK5Q16478 980 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 Q3C1V9 767 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 EPHA10Q5JZY3 1008 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 FOXD4L5Q5VV16 416 aaPredicted RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 MFSD5Q6N075 450 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 TYW1BQ6NUM6 668 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 DPP9Q86TI2 863 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 GJD3Q8N144 294 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 FERMT2Q96AC1 680 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 STK31Q9BXU1 1019 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 RBPJLQ9UBG7 517 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
CKAP4-203ENST00000553039 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
CKAP4-203ENST00000553039 PRUNE2Q8WUY3 3088 aa6.48□□□□□ -1.37
CKAP4-203ENST00000553039 POM121CA8CG34 1229 aa6.48□□□□□ -1.37
CKAP4-203ENST00000553039 GRXCR1A8MXD5 290 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms