RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 PDGFDQ9GZP0 370 aaPredicted RBP7.35□□□□□ -1.23
SMARCC2-213ENST00000552627 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
SMARCC2-213ENST00000552627 CCNL1Q9UK58 526 aaPredicted RBP7.35□□□□□ -1.23
SMARCC2-213ENST00000552627 CASZ1Q86V15 1759 aa7.35□□□□□ -1.23
SMARCC2-213ENST00000552627 C4BP0C0L5 1744 aa7.35□□□□□ -1.23
SMARCC2-213ENST00000552627 UBR2Q8IWV8 1755 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 ERVV-2B6SEH9 535 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 SLC39A6Q13433 755 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 WDR43Q15061 677 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 SMIM5Q71RC9 77 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 MCM10Q7L590 875 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 IL17REQ8NFR9 667 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 KANSL3Q9P2N6 904 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 TRIM33Q9UPN9 1127 aa7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 RRP7AQ9Y3A4 280 aaKnown RBP7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 COL5A3P25940 1745 aaPredicted RBP7.34□□□□□ -1.23
SMARCC2-213ENST00000552627 MAPK8IP3Q9UPT6 1336 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 KCPQ6ZWJ8 1503 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 SMNDC1O75940 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 BRD1O95696 1058 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 ATP11AP98196 1134 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 ITPK1Q13572 414 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 CEP135Q66GS9 1140 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 GJD3Q8N144 294 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 CACTIN-AS1Q8N1I8 211 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 CEP120Q8N960 986 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 THUMPD2Q9BTF0 503 aaKnown RBP7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 STK32BQ9NY57 414 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 SALL4Q9UJQ4 1053 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 BRPF3Q9ULD4 1205 aa7.33□□□□□ -1.24
SMARCC2-213ENST00000552627 QSER1Q2KHR3 1735 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 UBR3Q6ZT12 1888 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 C9orf172C9J069 976 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 TNFRSF21O75509 655 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 NFE2L2Q16236 605 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 SLC15A2Q16348 729 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 ECM1Q16610 540 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 AMIGO3Q86WK7 504 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 LINC00116Q8NCU8 138 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 SMARCC1Q92922 1105 aaPredicted RBP7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 ANP32EQ9BTT0 268 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 PBX4Q9BYU1 374 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 CHRDQ9H2X0 955 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 KDM3BQ7LBC6 1761 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 CEMIPQ8WUJ3 1361 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 ZNF831Q5JPB2 1677 aa7.32□□□□□ -1.24
SMARCC2-213ENST00000552627 CICQ96RK0 1608 aaPredicted RBP7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 KCNQ3O43525 872 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 PHACTR2O75167 634 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 NEFMP07197 916 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 SELPP16109 830 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 GATA4P43694 442 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 ARHGAP4P98171 946 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 TEFQ10587 303 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 SNX29Q8TEQ0 813 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 RTF1Q92541 710 aaKnown RBP7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 MUC3BQ9H195 1237 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 MIS18AQ9NYP9 233 aa7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
SMARCC2-213ENST00000552627 PNPLA7Q6ZV29 1317 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 MYH14Q7Z406 1995 aaKnown RBP7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 NDUFB5O43674 189 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 ZBTB7AO95365 584 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 TMPOP42166 694 aaKnown RBP7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 RIPK4P57078 832 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 NRG1Q02297 640 aaPredicted RBP7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 LENG1Q96BZ8 264 aaPredicted RBP7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 LACRTQ9GZZ8 138 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 TFCP2L1Q9NZI6 479 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 PPME1Q9Y570 386 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 LRP5O75197 1615 aa7.3□□□□□ -1.24
SMARCC2-213ENST00000552627 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 EREGO14944 169 aa7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 DEAF1O75398 565 aaPredicted RBP7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 CDC27P30260 824 aa7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 DNAJC10Q8IXB1 793 aa7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 PNISRQ8TF01 805 aaKnown RBP7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 POP1Q99575 1024 aaKnown RBP7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 PNNQ9H307 717 aaKnown RBP7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
SMARCC2-213ENST00000552627 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 APAF1O14727 1248 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 HTATSF1O43719 755 aaKnown RBP7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 PTPRAP18433 802 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 ZNF790Q6PG37 636 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 IGF2-ASQ6U949 168 aa7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 COL23A1Q86Y22 540 aaPredicted RBP7.28□□□□□ -1.24
SMARCC2-213ENST00000552627 MAP4K3Q8IVH8 894 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms