RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 BRF1Q92994 677 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 IL17RAQ96F46 866 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 OTUD5Q96G74 571 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 WNK4Q96J92 1243 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 TMEM47Q9BQJ4 181 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 ZNF341Q9BYN7 854 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
PFDN5-217ENST00000552548 EMILIN3Q9NT22 766 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
PFDN5-217ENST00000552548 PDRG1Q9NUG6 133 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
PFDN5-217ENST00000552548 COL2A1P02458 1487 aaPredicted RBP8.36□□□□□ -1.07
PFDN5-217ENST00000552548 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 IRF6O14896 467 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 IGSF3O75054 1194 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 AOC2O75106 756 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 ECM2O94769 699 aaPredicted RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 TSPY3P0CV98 308 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 TSPY8P0CW00 308 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 CDC27P30260 824 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 SPP2Q13103 211 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 ME3Q16798 604 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 TMEM67Q5HYA8 995 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 SCYL3Q8IZE3 742 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 ZNF444Q8N0Y2 327 aaPredicted RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 SMC1BQ8NDV3 1235 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 RBM46Q8TBY0 533 aaKnown RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 SHISA4Q96DD7 197 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 ZSCAN10Q96SZ4 725 aaPredicted RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 FBXO28Q9NVF7 368 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 MTMR4Q9NYA4 1195 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
PFDN5-217ENST00000552548 ZHX2Q9Y6X8 837 aa8.35□□□□□ -1.07
PFDN5-217ENST00000552548 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-217ENST00000552548 RAD21O60216 631 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 PLEKHA8P1O95397 391 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 SLC16A2P36021 539 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 MMP14P50281 582 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 FOSBP53539 338 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 HUNKP57058 714 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 PDE4BQ07343 736 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 MTMR2Q13614 643 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 SUPT20HL1Q3ZLR7 823 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 TMED8Q6PL24 325 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-217ENST00000552548 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 USP17L2Q6R6M4 530 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 SAMD1Q6SPF0 538 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-217ENST00000552548 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 RASAL3Q86YV0 1011 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 OPTNQ96CV9 577 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 PTPN18Q99952 460 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 TRIM34Q9BYJ4 488 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 UBA5Q9GZZ9 404 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 NAP1L2Q9ULW6 460 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-217ENST00000552548 AFG3L2Q9Y4W6 797 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 PPP2R3BQ9Y5P8 575 aa8.34□□□□□ -1.07
PFDN5-217ENST00000552548 GREB1LQ9C091 1923 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-217ENST00000552548 KLF18A0A0U1RQI7 1052 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 JAK2O60674 1132 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CTNND1O60716 968 aaKnown RBP8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CTDNEP1O95476 244 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 NDUFB10O96000 172 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 MCCP23508 829 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
PFDN5-217ENST00000552548 NOVP48745 357 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 HMGCS2P54868 508 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CAP1Q01518 475 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 ICA1Q05084 483 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 KCTD1Q719H9 257 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 RALYLQ86SE5 291 aaKnown RBP8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CERS3Q8IU89 383 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 ESR2Q92731 530 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 AIFM3Q96NN9 605 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 GJB4Q9NTQ9 266 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 HERC5Q9UII4 1024 aaKnown RBP8.33□□□□□ -1.08
PFDN5-217ENST00000552548 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 CYP46A1Q9Y6A2 500 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
PFDN5-217ENST00000552548 PHIPQ8WWQ0 1821 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
PFDN5-217ENST00000552548 PDIA3P30101 505 aaKnown RBP8.32□□□□□ -1.08
PFDN5-217ENST00000552548 MCM5P33992 734 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 SCRN1Q12765 414 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 WTAPQ15007 396 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
PFDN5-217ENST00000552548 FAM83BQ5T0W9 1011 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
PFDN5-217ENST00000552548 DCAF15Q66K64 600 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms