RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 SRGNP10124 158 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 NPR1P16066 1061 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 PLCG2P16885 1265 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 TCP11L1Q9NUJ3 509 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 A0A087WWV3 80 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 KRT2P35908 639 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 PLCD1P51178 756 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF75DP51815 510 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 CEP57L1Q8IYX8 460 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
RAB3IP-216ENST00000552199 TPM3P06753 285 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 PTPREP23469 700 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 KIF5BP33176 963 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 COA1Q9GZY4 146 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 CEP131Q9UPN4 1083 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 PCDHB6Q9Y5E3 794 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 GAKO14976 1311 aa16.12■□□□□ 0.17
RAB3IP-216ENST00000552199 GOLGA6L6A8MZA4 724 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 RHBDL3P58872 404 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 DHX40Q8IX18 779 aaKnown RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 FBXO2Q9UK22 296 aaPredicted RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 GTF2IP78347 998 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 SARM1Q6SZW1 724 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 KCNH3Q9ULD8 1083 aa16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
RAB3IP-216ENST00000552199 USP17L3A6NCW0 530 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 USP17L4A6NCW7 530 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 BECN2A8MW95 431 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 OFD1O75665 1012 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 SCG2P13521 617 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 RASA1P20936 1047 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 PDE6BP35913 854 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 NLRP12P59046 1061 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 NPY5RQ15761 445 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 USP17L1Q7RTZ2 530 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 SRPRBQ9Y5M8 271 aaKnown RBP16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 MYH1P12882 1939 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 FLT1P17948 1338 aa16.1■□□□□ 0.17
RAB3IP-216ENST00000552199 MMP10P09238 476 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 KIAA2012Q0VF49 1180 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 TNFRSF25Q93038 417 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 ZC3H12CQ9C0D7 883 aaKnown RBP16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 ATP2B1P20020 1258 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 CDK8P49336 464 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 GRIN1Q05586 938 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 GRM4Q14833 912 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 DPCR1Q3MIW9 517 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 FBXW7Q969H0 707 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 FAM13BQ9NYF5 915 aa16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 BAZ2BQ9UIF8 2168 aaKnown RBP16.09■□□□□ 0.17
RAB3IP-216ENST00000552199 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.16
RAB3IP-216ENST00000552199 CDC25BP30305 580 aa16.08■□□□□ 0.16
RAB3IP-216ENST00000552199 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
RAB3IP-216ENST00000552199 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.16
RAB3IP-216ENST00000552199 BIN1O00499 593 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 GNAQP50148 359 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 MASTLQ96GX5 879 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms