RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
GCN1-209ENST00000551920 AS3MTQ9HBK9 375 aa19.48■□□□□ 0.71
GCN1-209ENST00000551920 CABP5Q9NP86 173 aa19.48■□□□□ 0.71
GCN1-209ENST00000551920 A0A1W2PRG0 241 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 ALDH1A1P00352 501 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 PTH1RQ03431 593 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 GADL1Q6ZQY3 521 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 NKX2-3Q8TAU0 364 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 RUFY2Q8WXA3 655 aa19.47■□□□□ 0.71
GCN1-209ENST00000551920 PLIN4Q96Q06 1357 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 PDHXO00330 501 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 ICA1Q05084 483 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 MKNK2Q9HBH9 465 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 ZCCHC17Q9NP64 241 aaKnown RBP19.46■□□□□ 0.71
GCN1-209ENST00000551920 EMILIN3Q9NT22 766 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 ADGRA2Q96PE1 1338 aa19.46■□□□□ 0.71
GCN1-209ENST00000551920 IGKV6D-41A0A0C4DH26 115 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 USP17L10C9JJH3 530 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 FGRP09769 529 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 PDE4BQ07343 736 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
GCN1-209ENST00000551920 ZYXQ15942 572 aaKnown RBP19.45■□□□□ 0.7
GCN1-209ENST00000551920 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 FASTKD5Q7L8L6 764 aaKnown RBP19.45■□□□□ 0.7
GCN1-209ENST00000551920 PROCA1Q8NCQ7 364 aaPredicted RBP19.45■□□□□ 0.7
GCN1-209ENST00000551920 ESYT1Q9BSJ8 1104 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
GCN1-209ENST00000551920 SLC3A2P08195 630 aaKnown RBP19.44■□□□□ 0.7
GCN1-209ENST00000551920 FAM47AQ5JRC9 791 aa19.44■□□□□ 0.7
GCN1-209ENST00000551920 KIAA1755Q5JYT7 1200 aa19.44■□□□□ 0.7
GCN1-209ENST00000551920 FEZ1Q99689 392 aa19.44■□□□□ 0.7
GCN1-209ENST00000551920 NEDD4P46934 1319 aa19.44■□□□□ 0.7
GCN1-209ENST00000551920 ORC4O43929 436 aa19.43■□□□□ 0.7
GCN1-209ENST00000551920 CDC45O75419 566 aa19.43■□□□□ 0.7
GCN1-209ENST00000551920 CYP2C8P10632 490 aa19.43■□□□□ 0.7
GCN1-209ENST00000551920 C12orf42Q96LP6 360 aa19.43■□□□□ 0.7
GCN1-209ENST00000551920 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
GCN1-209ENST00000551920 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 GPR25O00155 361 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
GCN1-209ENST00000551920 STAG1Q8WVM7 1258 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 CEP95Q96GE4 821 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 LSG1Q9H089 658 aaKnown RBP19.42■□□□□ 0.7
GCN1-209ENST00000551920 KANSL2Q9H9L4 492 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 PRDM10Q9NQV6 1147 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 TAF6LQ9Y6J9 622 aa19.42■□□□□ 0.7
GCN1-209ENST00000551920 NMT2O60551 498 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 VCAM1P19320 739 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 TFAP4Q01664 338 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 NOM1Q5C9Z4 860 aaKnown RBP19.41■□□□□ 0.7
GCN1-209ENST00000551920 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 USP17L2Q6R6M4 530 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 ZNF444Q8N0Y2 327 aaPredicted RBP19.41■□□□□ 0.7
GCN1-209ENST00000551920 NEDD1Q8NHV4 660 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 ZNF296Q8WUU4 475 aaPredicted RBP19.41■□□□□ 0.7
GCN1-209ENST00000551920 TMOD4Q9NZQ9 345 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 TMX2Q9Y320 296 aa19.41■□□□□ 0.7
GCN1-209ENST00000551920 ZNF213O14771 459 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 TLR2O60603 784 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 TSPY3P0CV98 308 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 TSPY8P0CW00 308 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 CAP1Q01518 475 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 MAP4K1Q92918 833 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
GCN1-209ENST00000551920 ZFYVE28Q9HCC9 887 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 IL17RBQ9NRM6 502 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 MTMR4Q9NYA4 1195 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 CTNNA3Q9UI47 895 aa19.4■□□□□ 0.7
GCN1-209ENST00000551920 HTTP42858 3142 aa19.39■□□□□ 0.69
GCN1-209ENST00000551920 RANBP6O60518 1105 aaKnown RBP19.39■□□□□ 0.69
GCN1-209ENST00000551920 USP14P54578 494 aa19.39■□□□□ 0.69
GCN1-209ENST00000551920 ATP2B2Q01814 1243 aa19.39■□□□□ 0.69
GCN1-209ENST00000551920 IMMTQ16891 758 aaKnown RBP19.39■□□□□ 0.69
GCN1-209ENST00000551920 RRP12Q5JTH9 1297 aaKnown RBP19.39■□□□□ 0.69
GCN1-209ENST00000551920 COL13A1Q5TAT6 717 aaPredicted RBP19.39■□□□□ 0.69
GCN1-209ENST00000551920 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
GCN1-209ENST00000551920 ARHGEF10LQ9HCE6 1279 aa19.39■□□□□ 0.69
GCN1-209ENST00000551920 TSPY2A6NKD2 308 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 CYP21A2P08686 494 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 HOXA7P31268 230 aaPredicted RBP19.38■□□□□ 0.69
GCN1-209ENST00000551920 POTEEQ6S8J3 1075 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 C17orf99Q6UX52 265 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 MFSD6Q6ZSS7 791 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 SPICE1Q8N0Z3 855 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 VCPKMTQ9H867 229 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 NYAP2Q9P242 653 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 CPA4Q9UI42 421 aa19.38■□□□□ 0.69
GCN1-209ENST00000551920 RBM8AQ9Y5S9 174 aaKnown RBP19.38■□□□□ 0.69
GCN1-209ENST00000551920 U3KPZ7 1027 aaPredicted RBP19.38■□□□□ 0.69
GCN1-209ENST00000551920 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
GCN1-209ENST00000551920 LRRC47Q8N1G4 583 aaKnown RBP19.37■□□□□ 0.69
GCN1-209ENST00000551920 RNF41Q9H4P4 317 aaPredicted RBP19.37■□□□□ 0.69
GCN1-209ENST00000551920 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
GCN1-209ENST00000551920 ANO2Q9NQ90 1003 aa19.37■□□□□ 0.69
GCN1-209ENST00000551920 CASP8AP2Q9UKL3 1982 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 FKTNO75072 461 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 BCRP11274 1271 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms