RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 BACE1P56817 501 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 GADL1Q6ZQY3 521 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 FAM43AQ8N2R8 423 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 ZCCHC17Q9NP64 241 aaKnown RBP12.63□□□□□ -0.39
PTCH1-225ENST00000551845 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-225ENST00000551845 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 MAST2Q6P0Q8 1798 aa12.63□□□□□ -0.39
PTCH1-225ENST00000551845 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
PTCH1-225ENST00000551845 DOCK2Q92608 1830 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 ZNF213O14771 459 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 FOXP2O15409 715 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 AKR1B1P15121 316 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 USP14P54578 494 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 SEPT2Q15019 361 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-225ENST00000551845 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 CD99L2Q8TCZ2 262 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 ANAPC4Q9UJX5 808 aa12.62□□□□□ -0.39
PTCH1-225ENST00000551845 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
PTCH1-225ENST00000551845 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 PDHXO00330 501 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 PRDM1O75626 825 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 HMGCS2P54868 508 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCH1-225ENST00000551845 MTMR2Q13614 643 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-225ENST00000551845 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 CASC1Q6TDU7 716 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-225ENST00000551845 EFCC1Q9HA90 598 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 RAD50Q92878 1312 aa12.61□□□□□ -0.39
PTCH1-225ENST00000551845 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 RASA1P20936 1047 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 TFAP4Q01664 338 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 MOGSQ13724 837 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 GPAT2Q6NUI2 795 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 FEZ1Q99689 392 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 SLC45A1Q9Y2W3 748 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
PTCH1-225ENST00000551845 SGSM2O43147 1006 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 TLR2O60603 784 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 FGRP09769 529 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 PCP11498 1178 aaKnown RBP12.59□□□□□ -0.39
PTCH1-225ENST00000551845 OSBPP22059 807 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 ATP2B2Q01814 1243 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 ICA1Q05084 483 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 CRHR2Q13324 411 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
PTCH1-225ENST00000551845 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 PARK7Q99497 189 aaKnown RBP12.59□□□□□ -0.39
PTCH1-225ENST00000551845 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-225ENST00000551845 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
PTCH1-225ENST00000551845 TSPY2A6NKD2 308 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 DLL1O00548 723 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
PTCH1-225ENST00000551845 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
PTCH1-225ENST00000551845 HOXA7P31268 230 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-225ENST00000551845 HAND2P61296 217 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.4
PTCH1-225ENST00000551845 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 AKNAD1Q5T1N1 836 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 IL25Q9H293 177 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 TMX2Q9Y320 296 aa12.58□□□□□ -0.4
PTCH1-225ENST00000551845 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 ORC4O43929 436 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 CDC45O75419 566 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 CYP2C8P10632 490 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 NT5C2P49902 561 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 SP3Q02447 781 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 FAM47AQ5JRC9 791 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
PTCH1-225ENST00000551845 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms