RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CATSPERGQ6ZRH7 1159 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 TBC1D9Q6ZT07 1266 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 DPP9Q86TI2 863 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 ATXN2LQ8WWM7 1075 aaKnown RBP18.82■□□□□ 0.6
CACNB3-220ENST00000551716 RNPC3Q96LT9 517 aaKnown RBP18.82■□□□□ 0.6
CACNB3-220ENST00000551716 SLC5A4Q9NY91 659 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
CACNB3-220ENST00000551716 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
CACNB3-220ENST00000551716 SEPT4O43236 478 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 IGSF3O75054 1194 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 CNMDO75829 334 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 GDF11O95390 407 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 IGHA2P01877 340 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 CYBAP13498 195 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 TGFBRAP1Q8WUH2 860 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 FEZ1Q99689 392 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 PDLIM7Q9NR12 457 aa18.81■□□□□ 0.6
CACNB3-220ENST00000551716 UQCRFS1P1P0C7P4 283 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 TFCP2Q12800 502 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 TRPV1Q8NER1 839 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 NPLOC4Q8TAT6 608 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 DNAJC18Q9H819 358 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 MAST2Q6P0Q8 1798 aa18.8■□□□□ 0.6
CACNB3-220ENST00000551716 TRIM43BA6NCK2 446 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 ARID4AP29374 1257 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-220ENST00000551716 ADCYAP1R1P41586 468 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 ALDH1L2Q3SY69 923 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-220ENST00000551716 MAPKAPK5Q8IW41 473 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 TRIM43Q96BQ3 446 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-220ENST00000551716 FAM122AQ96E09 287 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 KIAA1683Q9H0B3 1180 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 AATFQ9NY61 560 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNB3-220ENST00000551716 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
CACNB3-220ENST00000551716 FLT1P17948 1338 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 MUC3AQ02505 3323 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 GH2P01242 217 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-220ENST00000551716 PLA2G5P39877 138 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 TLE2Q04725 743 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 HOXC10Q9NYD6 342 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 ATAD5Q96QE3 1844 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 CDH23Q9H251 3354 aa18.78■□□□□ 0.6
CACNB3-220ENST00000551716 RAG1P15918 1043 aa18.77■□□□□ 0.6
CACNB3-220ENST00000551716 SH3RF1Q7Z6J0 888 aa18.77■□□□□ 0.6
CACNB3-220ENST00000551716 ZNF576Q9H609 170 aa18.77■□□□□ 0.6
CACNB3-220ENST00000551716 BTBD7Q9P203 1132 aa18.77■□□□□ 0.6
CACNB3-220ENST00000551716 KIAA0355O15063 1070 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 CLTBP09497 229 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 DNAJB2P25686 324 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 FPGSQ05932 587 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 LRRC41Q15345 812 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 TATDN1Q6P1N9 297 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
CACNB3-220ENST00000551716 GAS2L1Q99501 681 aaPredicted RBP18.76■□□□□ 0.59
CACNB3-220ENST00000551716 LTBP2Q14767 1821 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 VCAM1P19320 739 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 ADORA2AP29274 412 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
CACNB3-220ENST00000551716 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
CACNB3-220ENST00000551716 AKNAD1Q5T1N1 836 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 USP38Q8NB14 1042 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 SHCBP1Q8NEM2 672 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 ASB2Q96Q27 587 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 PHF24Q9UPV7 400 aa18.75■□□□□ 0.59
CACNB3-220ENST00000551716 E9PSI1 815 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 MCAMP43121 646 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 MRPS5P82675 430 aaKnown RBP18.74■□□□□ 0.59
CACNB3-220ENST00000551716 COG2Q14746 738 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 ANO1Q5XXA6 986 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 CCDC174Q6PII3 467 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 RNF180Q86T96 592 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 IL27Q8NEV9 243 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 TIFAQ96CG3 184 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 CABP5Q9NP86 173 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
CACNB3-220ENST00000551716 SPDYE16A6NNV3 312 aaPredicted RBP18.73■□□□□ 0.59
CACNB3-220ENST00000551716 MOV10L1Q9BXT6 1211 aaKnown RBP18.73■□□□□ 0.59
CACNB3-220ENST00000551716 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
CACNB3-220ENST00000551716 MROH8Q9H579 483 aa18.73■□□□□ 0.59
CACNB3-220ENST00000551716 RPAP3Q9H6T3 665 aaPredicted RBP18.73■□□□□ 0.59
CACNB3-220ENST00000551716 TMEM39AQ9NV64 488 aa18.73■□□□□ 0.59
CACNB3-220ENST00000551716 THEGQ9P2T0 379 aa18.73■□□□□ 0.59
CACNB3-220ENST00000551716 SAP30BPQ9UHR5 308 aaKnown RBP18.73■□□□□ 0.59
CACNB3-220ENST00000551716 SERPINB13Q9UIV8 391 aa18.73■□□□□ 0.59
CACNB3-220ENST00000551716 ZNF521Q96K83 1311 aa18.73■□□□□ 0.59
CACNB3-220ENST00000551716 GNAI3P08754 354 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 RARBP10826 455 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 ITGB8P26012 769 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 EPHB4P54760 987 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 MTX1Q13505 466 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms