RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	ZNF711	Q9Y462	761 aa		4.38	□□□□□ -1.71
CNOT2-231	ENST00000551483	PCNA	P12004	261 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SERPINB3	P29508	390 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SLC4A3	P48751	1232 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	BLVRA	P53004	296 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ARPC4	P59998	168 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PPP1R7	Q15435	360 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SMUG1	Q53HV7	270 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	IFFO2	Q5TF58	517 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CEP135	Q66GS9	1140 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SASS6	Q6UVJ0	657 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ARHGEF18	Q6ZSZ5	1173 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	TMEM151B	Q8IW70	566 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ERMN	Q8TAM6	284 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	HDAC7	Q8WUI4	952 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PPP1R14B	Q96C90	147 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CLIP3	Q96DZ5	547 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	KIF1BP	Q96EK5	621 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	DDX11	Q96FC9	970 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	TEX13B	Q9BXU2	312 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	BICC1	Q9H694	974 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	GRPEL1	Q9HAV7	217 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	TCF7L2	Q9NQB0	619 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	FRMD3	A2A2Y4	597 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483		M0QX08	132 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	LSM1	O15116	133 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ZSCAN22	P10073	491 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CHKA	P35790	457 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CTCF	P49711	727 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SMAD4	Q13485	552 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MTMR3	Q13615	1198 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SEMA3A	Q14563	771 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ATP2B3	Q16720	1220 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PLEKHG4	Q58EX7	1191 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	HSP90AA5P	Q58FG0	334 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	POMZP3	Q6PJE2	187 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CRTC1	Q6UUV9	634 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	BEND5	Q7L4P6	421 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	BBOF1	Q8ND07	529 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	EPS8L3	Q8TE67	593 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CNDP2	Q96KP4	475 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CEP295NL	Q96MC4	621 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	TRIM55	Q9BYV6	548 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	GPHN	Q9NQX3	736 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	EDAR	Q9UNE0	448 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	FARP1	Q9Y4F1	1045 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	GOLGA6L10	A6NI86	522 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CASQ2	O14958	399 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ZBTB43	O43298	467 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CLASP2	O75122	1294 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PPP1R37	O75864	691 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	VARS	P26640	1264 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	HADHA	P40939	763 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	POLD2	P49005	469 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PPP2R3A	Q06190	1150 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SPATA21	Q7Z572	469 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	VPS37D	Q86XT2	251 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	OR8H1	Q8NGG4	311 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PPP1R9B	Q96SB3	815 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	LAMP5	Q9UJQ1	280 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SMARCA2	P51531	1590 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	FSD2	A1L4K1	749 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	POLR3G	O15318	223 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	NMT2	O60551	498 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	DIAPH2	O60879	1101 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MAPK8	P45983	427 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	EPHB1	P54762	984 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	HDAC4	P56524	1084 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	GABRE	P78334	506 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ROR1	Q01973	937 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	LAMB3	Q13751	1172 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MLC1	Q15049	377 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	OASL	Q15646	514 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	RBM20	Q5T481	1227 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	PRPF38B	Q5VTL8	546 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MTHFD1L	Q6UB35	978 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ALKBH8	Q96BT7	664 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	NUDT16	Q96DE0	195 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	UQCC2	Q9BRT2	126 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	KATNAL1	Q9BW62	490 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	MRPL9	Q9BYD2	267 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	STARD7	Q9NQZ5	370 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	ATP8A2	Q9NTI2	1148 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	HDAC6	Q9UBN7	1215 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	CCDC39	Q9UFE4	941 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	SQOR	Q9Y6N5	450 aa		4.37	□□□□□ -1.71
CNOT2-231	ENST00000551483	KPNA6	O60684	536 aa		4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	F2	P00734	622 aa		4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	FDX1	P10109	184 aa		4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	GZMA	P12544	262 aa		4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	ATP5D	P30049	168 aa		4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	CLK2	P49760	499 aa	Known RBP	4.36	□□□□□ -1.71
CNOT2-231	ENST00000551483	ST13	P50502	369 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms