RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 NR5A1Q13285 461 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 GRM4Q14833 912 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 CCDC178Q5BJE1 867 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.28
RAB5C-208ENST00000551338 EYA3Q99504 573 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 MXD3Q9BW11 206 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 USP25Q9UHP3 1055 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
RAB5C-208ENST00000551338 FAM237AA0A1B0GTK4 181 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 USP17L3A6NCW0 530 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 USP17L4A6NCW7 530 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 ESPNB1AK53 854 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 AP5Z1O43299 807 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 CDK8P49336 464 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 NDUFA8P51970 172 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 USP17L1Q7RTZ2 530 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 CBX8Q9HC52 389 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 HPSEQ9Y251 543 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
RAB5C-208ENST00000551338 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
RAB5C-208ENST00000551338 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-208ENST00000551338 H0YIN7 160 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 CUTAO60888 179 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 TSPY3P0CV98 308 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 TSPY8P0CW00 308 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 PFKFB1P16118 471 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 CMA1P23946 247 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 CHRNA5P30532 468 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 NPY5RQ15761 445 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 HS1BP3Q53T59 392 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 RILPL1Q5EBL4 403 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 SHC4Q6S5L8 630 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
RAB5C-208ENST00000551338 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
RAB5C-208ENST00000551338 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-208ENST00000551338 ADCY5O95622 1261 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 XBP1P17861 261 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 KIF5BP33176 963 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 KRT2P35908 639 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 GABPAQ06546 454 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 STX1AQ16623 288 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 SLC35G1Q2M3R5 365 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 C11orf57Q6ZUT1 292 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-208ENST00000551338 ZNF444Q8N0Y2 327 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-208ENST00000551338 TNFRSF25Q93038 417 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 DBNDD1Q9H9R9 158 aa13.26□□□□□ -0.29
RAB5C-208ENST00000551338 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
RAB5C-208ENST00000551338 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.26□□□□□ -0.29
RAB5C-208ENST00000551338 ZNF202O95125 648 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 SCG2P13521 617 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 SCNN1DP51172 638 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 LUZP1Q86V48 1076 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 C7orf43Q8WVR3 580 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 TMX4Q9H1E5 349 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 FBXO2Q9UK22 296 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
RAB5C-208ENST00000551338 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-208ENST00000551338 ECE2O60344 883 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 VEGFAP15692 232 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-208ENST00000551338 PTPREP23469 700 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 NOVP48745 357 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 PICALMQ13492 652 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 IQCB1Q15051 598 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
RAB5C-208ENST00000551338 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms