RNA–Protein interactions for RNA: ENST00000551018.5

PFDN5-214, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-214ENST00000551018 ALPK3Q96L96 1907 aa9.81□□□□□ -0.84
PFDN5-214ENST00000551018 DDX60LQ5H9U9 1706 aaKnown RBP9.8□□□□□ -0.84
PFDN5-214ENST00000551018 USP17L10C9JJH3 530 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 MAP4K4O95819 1239 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-214ENST00000551018 HLA-DOAP06340 250 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 PLCG2P16885 1265 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 ZKSCAN1P17029 563 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-214ENST00000551018 CCND3P30281 292 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-214ENST00000551018 USP5P45974 858 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 RAB3GAP1Q15042 981 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 Q7L0L9 218 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 ITPRIPQ8IWB1 547 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 MAGEB6Q8N7X4 407 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 DBNLQ9UJU6 430 aaKnown RBP9.8□□□□□ -0.84
PFDN5-214ENST00000551018 PFASO15067 1338 aa9.8□□□□□ -0.84
PFDN5-214ENST00000551018 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 MAGEA10P43363 369 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-214ENST00000551018 PPP4CP60510 307 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 ERVK-24P63145 666 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 CACNB2Q08289 660 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-214ENST00000551018 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 GPR142Q7Z601 462 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 FTSJ3Q8IY81 847 aaKnown RBP9.79□□□□□ -0.84
PFDN5-214ENST00000551018 ANKLE1Q8NAG6 615 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
PFDN5-214ENST00000551018 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 APBB1O00213 710 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 RLBP1P12271 317 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 MAPK4P31152 587 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 PLEKHH3Q7Z736 793 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 FOXP4Q8IVH2 680 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 ACER1Q8TDN7 264 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 SSH3Q8TE77 659 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 SOCS4Q8WXH5 440 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 EAF2Q96CJ1 260 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 APBA2Q99767 749 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 GDF15Q99988 308 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 UBE2OQ9C0C9 1292 aaKnown RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 GPR108Q9NPR9 543 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 EXOC6BQ9Y2D4 811 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
PFDN5-214ENST00000551018 MYO5AQ9Y4I1 1855 aaKnown RBP9.78□□□□□ -0.84
PFDN5-214ENST00000551018 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 A0A1W2PPC1 479 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 DLL1O00548 723 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 CNMDO75829 334 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 SEC24BO95487 1268 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 CNGA1P29973 690 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 RGS2P41220 211 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 LRRC26Q2I0M4 334 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 AACSQ86V21 672 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 METTL16Q86W50 562 aaKnown RBP9.77□□□□□ -0.85
PFDN5-214ENST00000551018 DEFB123Q8N688 67 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 FLRT1Q9NZU1 646 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-214ENST00000551018 OGDHLQ9ULD0 1010 aa9.77□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 CCER2I3L3R5 266 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 MPHOSPH10O00566 681 aaKnown RBP9.76□□□□□ -0.85
PFDN5-214ENST00000551018 XRCC5P13010 732 aaKnown RBP9.76□□□□□ -0.85
PFDN5-214ENST00000551018 VCAM1P19320 739 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 ABCB5Q2M3G0 1257 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 CERKLQ49MI3 558 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-214ENST00000551018 MORN1Q5T089 497 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 USP6NLQ92738 828 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 RPAP3Q9H6T3 665 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-214ENST00000551018 IL1RAPL2Q9NP60 686 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 BTBD7Q9P203 1132 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 SERPINB13Q9UIV8 391 aa9.76□□□□□ -0.85
PFDN5-214ENST00000551018 COL6A3P12111 3177 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 FOCADQ5VW36 1801 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
PFDN5-214ENST00000551018 CYP2D6P10635 497 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 CYP2C19P33261 490 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 SHMT1P34896 483 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 PLCD1P51178 756 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
PFDN5-214ENST00000551018 SEPT2Q15019 361 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 MFSD14CQ5VZR4 134 aa9.75□□□□□ -0.85
PFDN5-214ENST00000551018 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms