RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SHMT1P34896 483 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 PLCD1P51178 756 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP14P54578 494 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L24Q0WX57 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 RAB3GAP1Q15042 981 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 TTF1Q15361 905 aaPredicted RBP26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 ZYXQ15942 572 aaKnown RBP26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 ABCB5Q2M3G0 1257 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 FEZ1Q99689 392 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 NBPF3Q9H094 633 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 RABGAP1Q9Y3P9 1069 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 A0A1W2PPC1 479 aa26.35■■□□□ 1.81
SMARCC2-210ENST00000550519 CATSPERGQ6ZRH7 1159 aa26.35■■□□□ 1.81
SMARCC2-210ENST00000550519 PLEKHH3Q7Z736 793 aa26.35■■□□□ 1.81
SMARCC2-210ENST00000550519 CCAR1Q8IX12 1150 aaKnown RBP26.35■■□□□ 1.81
SMARCC2-210ENST00000550519 ACER1Q8TDN7 264 aa26.35■■□□□ 1.81
SMARCC2-210ENST00000550519 MAGEB6P1A0A0J9YX57 407 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 CNMDO75829 334 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 ZKSCAN1P17029 563 aaPredicted RBP26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 RGS2P41220 211 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 GABPAQ06546 454 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 SLC9C2Q5TAH2 1124 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 CABP5Q9NP86 173 aa26.34■■□□□ 1.81
SMARCC2-210ENST00000550519 MS4A1P11836 297 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 PDE6AP16499 860 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 VCAM1P19320 739 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 GUCY1A2P33402 732 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 CACNB2Q08289 660 aaPredicted RBP26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 CLASRPQ8N2M8 674 aaKnown RBP26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 KIF1BPQ96EK5 621 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 STAP2Q9UGK3 403 aa26.33■■□□□ 1.81
SMARCC2-210ENST00000550519 POLR3DP05423 398 aaPredicted RBP26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 CCL14Q16627 93 aa26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 LBX2Q6XYB7 198 aa26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 RPAP2Q8IXW5 612 aaPredicted RBP26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 APBA2Q99767 749 aa26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 C11orf49Q9H6J7 331 aa26.32■■□□□ 1.8
SMARCC2-210ENST00000550519 CCNA1P78396 465 aa26.31■■□□□ 1.8
SMARCC2-210ENST00000550519 DIEXFQ68CQ4 756 aaKnown RBP26.31■■□□□ 1.8
SMARCC2-210ENST00000550519 SIRT2Q8IXJ6 389 aa26.31■■□□□ 1.8
SMARCC2-210ENST00000550519 CRNKL1Q9BZJ0 848 aaKnown RBP26.31■■□□□ 1.8
SMARCC2-210ENST00000550519 ALPK3Q96L96 1907 aa26.31■■□□□ 1.8
SMARCC2-210ENST00000550519 TCRBV5S4A2TA0A5A2 114 aa26.3■■□□□ 1.8
SMARCC2-210ENST00000550519 MAP2K5Q13163 448 aa26.3■■□□□ 1.8
SMARCC2-210ENST00000550519 C7orf61Q8IZ16 206 aa26.3■■□□□ 1.8
SMARCC2-210ENST00000550519 GDF15Q99988 308 aa26.3■■□□□ 1.8
SMARCC2-210ENST00000550519 ZNF532Q9HCE3 1301 aa26.3■■□□□ 1.8
SMARCC2-210ENST00000550519 DDX60LQ5H9U9 1706 aaKnown RBP26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 GOLIM4O00461 696 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 EVX2Q03828 476 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 LHX8Q68G74 356 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 ZBTB40Q9NUA8 1239 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 MCM9Q9NXL9 1143 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 BTBD7Q9P203 1132 aa26.29■■□□□ 1.8
SMARCC2-210ENST00000550519 APBB1O00213 710 aa26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 HMMRO75330 724 aa26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 GLRX3O76003 335 aaKnown RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 IFIT2P09913 472 aaKnown RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 CCND3P30281 292 aaPredicted RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 SEPT2Q15019 361 aa26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 EDC3Q96F86 508 aaKnown RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 DNAJC2Q99543 621 aaKnown RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 RPAP3Q9H6T3 665 aaPredicted RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 CWC22Q9HCG8 908 aaKnown RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 DCP1AQ9NPI6 582 aaPredicted RBP26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 DDX19BQ9UMR2 479 aa26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 PFASO15067 1338 aa26.28■■□□□ 1.8
SMARCC2-210ENST00000550519 SPDYE16A6NNV3 312 aaPredicted RBP26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 COL6A1P12109 1028 aa26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 PTPREP23469 700 aa26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 BMP8BP34820 402 aa26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 LCORLQ8N3X6 602 aa26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 SDR42E1Q8WUS8 393 aa26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 ZMYND8Q9ULU4 1186 aaPredicted RBP26.27■■□□□ 1.8
SMARCC2-210ENST00000550519 A0A1W2PRG0 241 aa26.26■■□□□ 1.79
SMARCC2-210ENST00000550519 SLC15A5A6NIM6 579 aa26.26■■□□□ 1.79
SMARCC2-210ENST00000550519 RAB11FIP3O75154 756 aa26.26■■□□□ 1.79
SMARCC2-210ENST00000550519 COG6Q9Y2V7 657 aa26.26■■□□□ 1.79
SMARCC2-210ENST00000550519 SOX1O00570 391 aaPredicted RBP26.25■■□□□ 1.79
SMARCC2-210ENST00000550519 HOXC6P09630 235 aa26.25■■□□□ 1.79
SMARCC2-210ENST00000550519 FLRT1Q9NZU1 646 aa26.25■■□□□ 1.79
SMARCC2-210ENST00000550519 GRB14Q14449 540 aa26.24■■□□□ 1.79
SMARCC2-210ENST00000550519 WDR78Q5VTH9 848 aa26.24■■□□□ 1.79
SMARCC2-210ENST00000550519 LAMA3Q16787 3333 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 MPHOSPH10O00566 681 aaKnown RBP26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 CYP2D6P10635 497 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 MFSD14CQ5VZR4 134 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 SLC44A5Q8NCS7 719 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 ARMT1Q9H993 441 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 PAG1Q9NWQ8 432 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 IVNS1ABPQ9Y6Y0 642 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 NAV1Q8NEY1 1877 aa26.23■■□□□ 1.79
SMARCC2-210ENST00000550519 ATP5JP18859 108 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 ADD2P35612 726 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 COG2Q14746 738 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 TMEM179Q6ZVK1 233 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 BOLA2Q9H3K6 86 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 HOXC10Q9NYD6 342 aa26.22■■□□□ 1.79
SMARCC2-210ENST00000550519 SWAP70Q9UH65 585 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms