RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TDO2P48775 406 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 TAF1CQ15572 869 aaPredicted RBP13.42□□□□□ -0.26
RAB5B-208ENST00000550283 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
RAB5B-208ENST00000550283 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 ANKRD23Q86SG2 305 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 ARHGAP39Q9C0H5 1083 aa13.42□□□□□ -0.26
RAB5B-208ENST00000550283 ARPP21Q9UBL0 812 aaPredicted RBP13.42□□□□□ -0.26
RAB5B-208ENST00000550283 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 GREB1LQ9C091 1923 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-208ENST00000550283 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
RAB5B-208ENST00000550283 FGAP02671 866 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 GNAT2P19087 354 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 CHMLP26374 656 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 BACE1P56817 501 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 SH3D19Q5HYK7 790 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 CPA4Q9UI42 421 aa13.41□□□□□ -0.26
RAB5B-208ENST00000550283 TNRC18O15417 2968 aaPredicted RBP13.4□□□□□ -0.26
RAB5B-208ENST00000550283 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 HAND2P61296 217 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 PPARAQ07869 468 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
RAB5B-208ENST00000550283 CD99L2Q8TCZ2 262 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 NAPBQ9H115 298 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 SWAP70Q9UH65 585 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAB5B-208ENST00000550283 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
RAB5B-208ENST00000550283 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 PTH1RQ03431 593 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 ALX1Q15699 326 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 C17orf99Q6UX52 265 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 DIAPH3Q9NSV4 1193 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
RAB5B-208ENST00000550283 IGKV6D-41A0A0C4DH26 115 aa13.38□□□□□ -0.27
RAB5B-208ENST00000550283 TLR2O60603 784 aa13.38□□□□□ -0.27
RAB5B-208ENST00000550283 FKTNO75072 461 aa13.38□□□□□ -0.27
RAB5B-208ENST00000550283 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
RAB5B-208ENST00000550283 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-208ENST00000550283 MYH8P13535 1937 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 NMT2O60551 498 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 BCRP11274 1271 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 EEF2P13639 858 aaKnown RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 TMEM179Q6ZVK1 233 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 PROCA1Q8NCQ7 364 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 P2RX7Q99572 595 aaKnown RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 KIAA1683Q9H0B3 1180 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
RAB5B-208ENST00000550283 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
RAB5B-208ENST00000550283 VCAM1P19320 739 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 ICA1Q05084 483 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 IL17RBQ9NRM6 502 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 NEDD4P46934 1319 aa13.36□□□□□ -0.27
RAB5B-208ENST00000550283 SGSM2O43147 1006 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 FGRP09769 529 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 SP3Q02447 781 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 USP17L2Q6R6M4 530 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 OTOP1Q7RTM1 612 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 CCDC17Q96LX7 622 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 FEZ1Q99689 392 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 MKNK2Q9HBH9 465 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 ZMYM6O95789 1325 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 RLFQ13129 1914 aa13.35□□□□□ -0.27
RAB5B-208ENST00000550283 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
RAB5B-208ENST00000550283 CNMDO75829 334 aa13.34□□□□□ -0.27
RAB5B-208ENST00000550283 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-208ENST00000550283 TFAP4Q01664 338 aa13.34□□□□□ -0.27
RAB5B-208ENST00000550283 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
RAB5B-208ENST00000550283 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
RAB5B-208ENST00000550283 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
RAB5B-208ENST00000550283 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
RAB5B-208ENST00000550283 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-208ENST00000550283 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-208ENST00000550283 CENPFP49454 3210 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms