RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 Q6ZUG5 572 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 ZSCAN10Q96SZ4 725 aaPredicted RBP10.59□□□□□ -0.71
CACNB3-215ENST00000550190 TM6SF1Q9BZW5 370 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 CLIP2Q9UDT6 1046 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 MTMR7Q9Y216 660 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 RAD21O60216 631 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 EEF2P13639 858 aaKnown RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 NT5C2P49902 561 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 ICA1Q05084 483 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 WTAPQ15007 396 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 CCDC178Q5BJE1 867 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 NOL9Q5SY16 702 aaKnown RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 NFXL1Q6ZNB6 911 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 CHMP4CQ96CF2 233 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 TMEM87BQ96K49 555 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 KIF2CQ99661 725 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 KANSL2Q9H9L4 492 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 ARHGEF10LQ9HCE6 1279 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 TCP11L1Q9NUJ3 509 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 MTMR4Q9NYA4 1195 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
CACNB3-215ENST00000550190 SNCAIPQ9Y6H5 919 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 ZHX2Q9Y6X8 837 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 TNKSO95271 1327 aa10.58□□□□□ -0.72
CACNB3-215ENST00000550190 IGKV6D-41A0A0C4DH26 115 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 CCDC69A6NI79 296 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 TTLL1O95922 423 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 PTPRAP18433 802 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 ZNF157P51786 506 aaPredicted RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 EXOSC10Q01780 885 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 RABEP1Q15276 862 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 ZYXQ15942 572 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 IFIT1BQ5T764 474 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 LRRC47Q8N1G4 583 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 ENAHQ8N8S7 591 aaPredicted RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 IL17RAQ96F46 866 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 FEZ1Q99689 392 aa10.57□□□□□ -0.72
CACNB3-215ENST00000550190 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
CACNB3-215ENST00000550190 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 SH2B2O14492 632 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-215ENST00000550190 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
CACNB3-215ENST00000550190 ECE1P42892 770 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 APLP1P51693 650 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 APOBRQ0VD83 1088 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 SPP2Q13103 211 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 GRM1Q13255 1194 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 SEC23AQ15436 765 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 SAPCD2Q86UD0 394 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 ERO1BQ86YB8 467 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 ACER1Q8TDN7 264 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 IGDCC4Q8TDY8 1250 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 BRF1Q92994 677 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 TTC14Q96N46 770 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 NYAP2Q9P242 653 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 TLL2Q9Y6L7 1015 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
CACNB3-215ENST00000550190 PTPRFP10586 1907 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 AK2P54819 239 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 PPATQ06203 517 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 RCSD1Q6JBY9 416 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 SYNE3Q6ZMZ3 975 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 DGKHQ86XP1 1220 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 RAB11FIP4Q86YS3 637 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 SIAH1Q8IUQ4 282 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 NUP133Q8WUM0 1156 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 WNK4Q96J92 1243 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 MTA3Q9BTC8 594 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
CACNB3-215ENST00000550190 LY9Q9HBG7 655 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms