RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
SMARCC2-209ENST00000550164 ANKRD65E5RJM6 399 aa11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 GNAQP50148 359 aa11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 SDR42E1Q8WUS8 393 aa11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 PPP1R12BO60237 982 aaPredicted RBP11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 CEP57Q86XR8 500 aa11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
SMARCC2-209ENST00000550164 ERCC5P28715 1186 aaPredicted RBP11.46□□□□□ -0.58
SMARCC2-209ENST00000550164 FAM207AQ9NSI2 230 aaPredicted RBP11.46□□□□□ -0.58
SMARCC2-209ENST00000550164 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.58
SMARCC2-209ENST00000550164 PDE8AO60658 829 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 INPP5BP32019 993 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 PTGDRQ13258 359 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 WDR24Q96S15 920 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 TNKSO95271 1327 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 NEFHP12036 1026 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 MAGEA1P43355 309 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 GREM2Q9H772 168 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 KIF28PB7ZC32 967 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 FOXN1O15353 648 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 CASP1P29466 404 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 NYAP1Q6ZVC0 841 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 FAM71BQ8TC56 605 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 EXOC4Q96A65 974 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 SH2B2O14492 632 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 BAG3O95817 575 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 PPARAQ07869 468 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 TSGA10Q9BZW7 698 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 INCENPQ9NQS7 918 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 CTDP1Q9Y5B0 961 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-209ENST00000550164 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 PLEKHG1Q9ULL1 1385 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 COPB1P53618 953 aaKnown RBP11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 TRAF5O00463 557 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 CDC25AP30304 524 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 CCDC121Q6ZUS5 278 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 CCDC114Q96M63 670 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 BPIFA3Q9BQP9 254 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 IFIH1Q9BYX4 1025 aaKnown RBP11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 MED4Q9NPJ6 270 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 ZNF609O15014 1411 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 TLDC2A0PJX2 215 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 TADA3O75528 432 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 LIG3P49916 1009 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 RAPGEF1Q13905 1077 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 UBE3CQ15386 1083 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 USPL1Q5W0Q7 1092 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 KRT79Q5XKE5 535 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 TICAM2Q86XR7 235 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 BCAS4Q8TDM0 211 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 C6orf50Q9HD87 102 aa11.44□□□□□ -0.58
SMARCC2-209ENST00000550164 NRKQ7Z2Y5 1582 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 MMP1P03956 469 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 TNNI2P48788 182 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 EXOSC10Q01780 885 aaKnown RBP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 CASP8Q14790 479 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 RESP18Q5W5W9 173 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 SHC4Q6S5L8 630 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 ANKRD13CQ8N6S4 541 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 GSDMAQ96QA5 445 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 SELENOOQ9BVL4 669 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 SMIM23A6NLE4 172 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 CIAO1O76071 339 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 ADD2P35612 726 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 MTF1Q14872 753 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 NUP58Q9BVL2 599 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 MYO1CO00159 1063 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 PRKAB2O43741 272 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 RNF40O75150 1001 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 IFNAR1P17181 557 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 ATP6V1AP38606 617 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 BCAMP50895 628 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 ATP1A2P50993 1020 aa11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 RBM5P52756 815 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMARCC2-209ENST00000550164 CTSWP56202 376 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms