RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 AKR1B1P15121 316 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 RASA1P20936 1047 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 HMGCS2P54868 508 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 MTMR2Q13614 643 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 SH3D19Q5HYK7 790 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 MFSD6Q6ZSS7 791 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 CFHR5Q9BXR6 569 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 SLC45A1Q9Y2W3 748 aa17.74■□□□□ 0.43
GPN3-206ENST00000549963 SMIM22K7EJ46 135 aa17.73■□□□□ 0.43
GPN3-206ENST00000549963 LBX1P52954 281 aa17.73■□□□□ 0.43
GPN3-206ENST00000549963 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
GPN3-206ENST00000549963 TSKSQ9UJT2 592 aa17.73■□□□□ 0.43
GPN3-206ENST00000549963 PNMA3Q9UL41 463 aa17.73■□□□□ 0.43
GPN3-206ENST00000549963 PTPRFP10586 1907 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
GPN3-206ENST00000549963 PRDM1O75626 825 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 HSPA8P11142 646 aaKnown RBP17.72■□□□□ 0.43
GPN3-206ENST00000549963 OSBPP22059 807 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 NT5C2P49902 561 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 TFAP4Q01664 338 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 ICA1Q05084 483 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 SHROOM1Q2M3G4 852 aaPredicted RBP17.72■□□□□ 0.43
GPN3-206ENST00000549963 ESYT1Q9BSJ8 1104 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 KIAA1683Q9H0B3 1180 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 PRDM10Q9NQV6 1147 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
GPN3-206ENST00000549963 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
GPN3-206ENST00000549963 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 ORC4O43929 436 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 HAND2P61296 217 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 CRHR2Q13324 411 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 NOM1Q5C9Z4 860 aaKnown RBP17.71■□□□□ 0.43
GPN3-206ENST00000549963 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.43
GPN3-206ENST00000549963 PARK7Q99497 189 aaKnown RBP17.71■□□□□ 0.43
GPN3-206ENST00000549963 MOGSQ13724 837 aa17.7■□□□□ 0.42
GPN3-206ENST00000549963 ZYXQ15942 572 aaKnown RBP17.7■□□□□ 0.42
GPN3-206ENST00000549963 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
GPN3-206ENST00000549963 NEDD1Q8NHV4 660 aa17.7■□□□□ 0.42
GPN3-206ENST00000549963 STAG1Q8WVM7 1258 aa17.7■□□□□ 0.42
GPN3-206ENST00000549963 GOPCQ9HD26 462 aa17.7■□□□□ 0.42
GPN3-206ENST00000549963 GPR25O00155 361 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 FGRP09769 529 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 EEF2P13639 858 aaKnown RBP17.69■□□□□ 0.42
GPN3-206ENST00000549963 IRX3P78415 501 aaPredicted RBP17.69■□□□□ 0.42
GPN3-206ENST00000549963 ARHGEF6Q15052 776 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 ACER1Q8TDN7 264 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
GPN3-206ENST00000549963 ESR2Q92731 530 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 CNNM2Q9H8M5 875 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 NYAP2Q9P242 653 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
GPN3-206ENST00000549963 TMX2Q9Y320 296 aa17.69■□□□□ 0.42
GPN3-206ENST00000549963 TLR2O60603 784 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 FKTNO75072 461 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 TTLL1O95922 423 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 HOXA7P31268 230 aaPredicted RBP17.68■□□□□ 0.42
GPN3-206ENST00000549963 PTH1RQ03431 593 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 TRDNQ13061 729 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 LPAR1Q92633 364 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 MAP4K1Q92918 833 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 KRT23Q9C075 422 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 IL25Q9H293 177 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 ANO2Q9NQ90 1003 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 CLIP2Q9UDT6 1046 aa17.68■□□□□ 0.42
GPN3-206ENST00000549963 USP17L15C9J2P7 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L13C9JLJ4 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L11C9JVI0 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L18D6R9N7 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L22D6RA61 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L17D6RBQ6 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L19D6RCP7 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L20D6RJB6 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 RAD21O60216 631 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 USP17L24Q0WX57 530 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 KIF22Q14807 665 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 INCENPQ9NQS7 918 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 MTMR4Q9NYA4 1195 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 CASP8AP2Q9UKL3 1982 aa17.67■□□□□ 0.42
GPN3-206ENST00000549963 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 A0A1W2PRG0 241 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 GCLCP48506 637 aaPredicted RBP17.66■□□□□ 0.42
GPN3-206ENST00000549963 SP3Q02447 781 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 CEP95Q96GE4 821 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 ERO1AQ96HE7 468 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.66■□□□□ 0.42
GPN3-206ENST00000549963 VCPKMTQ9H867 229 aa17.66■□□□□ 0.42
GPN3-206ENST00000549963 SYNPO2Q9UMS6 1093 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms