RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
CCDC38-208ENST00000549876 TMEM253P0C7T8 217 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 SLC6A19Q695T7 634 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 LILRA6Q6PI73 481 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 AGMOQ6ZNB7 445 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 DNAJB8Q8NHS0 232 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 MYLIPQ8WY64 445 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 DUSP15Q9H1R2 295 aaPredicted RBP7.98□□□□□ -1.13
CCDC38-208ENST00000549876 ADAMTS10Q9H324 1103 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 SP110Q9HB58 689 aa7.98□□□□□ -1.13
CCDC38-208ENST00000549876 PGRP06401 933 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 GLDCP23378 1020 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
CCDC38-208ENST00000549876 GNA15P30679 374 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 CCDC85BQ15834 202 aaPredicted RBP7.97□□□□□ -1.13
CCDC38-208ENST00000549876 KCNA10Q16322 511 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 ATG14Q6ZNE5 492 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 TTLL10Q6ZVT0 673 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 RAPGEFL1Q9UHV5 662 aa7.97□□□□□ -1.13
CCDC38-208ENST00000549876 ETV2O00321 342 aaPredicted RBP7.96□□□□□ -1.14
CCDC38-208ENST00000549876 ETV3P41162 512 aa7.96□□□□□ -1.14
CCDC38-208ENST00000549876 HK2P52789 917 aa7.96□□□□□ -1.14
CCDC38-208ENST00000549876 CREG2Q8IUH2 290 aa7.96□□□□□ -1.14
CCDC38-208ENST00000549876 MCATQ8IVS2 390 aaKnown RBP7.96□□□□□ -1.14
CCDC38-208ENST00000549876 SRFP11831 508 aa7.95□□□□□ -1.14
CCDC38-208ENST00000549876 TPP2P29144 1249 aaPredicted RBP7.95□□□□□ -1.14
CCDC38-208ENST00000549876 LIG3P49916 1009 aa7.95□□□□□ -1.14
CCDC38-208ENST00000549876 PPP1R13LQ8WUF5 828 aa7.95□□□□□ -1.14
CCDC38-208ENST00000549876 ACSF2Q96CM8 615 aaPredicted RBP7.95□□□□□ -1.14
CCDC38-208ENST00000549876 LMNB1P20700 586 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 GPR62Q9BZJ7 368 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 ADAM30Q9UKF2 790 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 CEP131Q9UPN4 1083 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 SMG5Q9UPR3 1016 aaKnown RBP7.94□□□□□ -1.14
CCDC38-208ENST00000549876 AK5Q9Y6K8 562 aa7.94□□□□□ -1.14
CCDC38-208ENST00000549876 TCAF2A6NFQ2 919 aa7.93□□□□□ -1.14
CCDC38-208ENST00000549876 TFE3P19532 575 aaPredicted RBP7.93□□□□□ -1.14
CCDC38-208ENST00000549876 TRHRP34981 398 aaPredicted RBP7.93□□□□□ -1.14
CCDC38-208ENST00000549876 RNF32Q9H0A6 362 aa7.93□□□□□ -1.14
CCDC38-208ENST00000549876 MIR1-1HGQ9H1L0 117 aa7.93□□□□□ -1.14
CCDC38-208ENST00000549876 TRIT1Q9H3H1 467 aaKnown RBP7.93□□□□□ -1.14
CCDC38-208ENST00000549876 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
CCDC38-208ENST00000549876 PDE4BQ07343 736 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 TSNAXIP1Q2TAA8 658 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 PDZD8Q8NEN9 1154 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 KCNN1Q92952 543 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 RNF19AQ9NV58 838 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 NCANO14594 1321 aa7.92□□□□□ -1.14
CCDC38-208ENST00000549876 PRRG2O14669 202 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 ZGLP1P0C6A0 271 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 RPL6Q02878 288 aaKnown RBP7.91□□□□□ -1.14
CCDC38-208ENST00000549876 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 CIAPIN1Q6FI81 312 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 TSPYL5Q86VY4 417 aaPredicted RBP7.91□□□□□ -1.14
CCDC38-208ENST00000549876 DTWD2Q8NBA8 298 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
CCDC38-208ENST00000549876 LINC00310P59036 64 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 EGR3Q06889 387 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 LILRA2Q8N149 483 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 CYB5D2Q8WUJ1 264 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 C19orf44Q9H6X5 657 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 GPATCH2Q9NW75 528 aa7.9□□□□□ -1.14
CCDC38-208ENST00000549876 INHBBP09529 407 aa7.89□□□□□ -1.15
CCDC38-208ENST00000549876 TIGD5Q53EQ6 642 aa7.89□□□□□ -1.15
CCDC38-208ENST00000549876 CORINQ9Y5Q5 1042 aa7.89□□□□□ -1.15
CCDC38-208ENST00000549876 UPK3BL1B0FP48 263 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 B8ZZF3 427 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 UPK3BL2E5RIL1 263 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 NR0B2Q15466 257 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 MEI1Q5TIA1 1274 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 IRF2BP1Q8IU81 584 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 DUSP9Q99956 384 aaKnown RBP7.88□□□□□ -1.15
CCDC38-208ENST00000549876 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 TLR6Q9Y2C9 796 aa7.88□□□□□ -1.15
CCDC38-208ENST00000549876 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
CCDC38-208ENST00000549876 NUAK1O60285 661 aa7.87□□□□□ -1.15
CCDC38-208ENST00000549876 TMEM201Q5SNT2 666 aa7.87□□□□□ -1.15
CCDC38-208ENST00000549876 OXR1Q8N573 874 aa7.87□□□□□ -1.15
CCDC38-208ENST00000549876 JARID2Q92833 1246 aaPredicted RBP7.87□□□□□ -1.15
CCDC38-208ENST00000549876 PCDHA11Q9Y5I1 949 aa7.87□□□□□ -1.15
CCDC38-208ENST00000549876 MYOCOSA0A1B0GUC4 107 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 FITM1A5D6W6 292 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 RLBP1P12271 317 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 PLCG1P19174 1290 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 PHC3Q8NDX5 983 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 FAM13CQ8NE31 585 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 RNF141Q8WVD5 230 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 NOC4LQ9BVI4 516 aaKnown RBP7.86□□□□□ -1.15
CCDC38-208ENST00000549876 SLC6A17Q9H1V8 727 aa7.86□□□□□ -1.15
CCDC38-208ENST00000549876 PEX10O60683 326 aa7.85□□□□□ -1.15
CCDC38-208ENST00000549876 LRRN2O75325 713 aa7.85□□□□□ -1.15
CCDC38-208ENST00000549876 LTKP29376 864 aa7.85□□□□□ -1.15
CCDC38-208ENST00000549876 CCDC84Q86UT8 332 aaPredicted RBP7.85□□□□□ -1.15
CCDC38-208ENST00000549876 DHX38Q92620 1227 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms