RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-208ENST00000549537 TCP10L2B9ZVM9 353 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 PPP1R12BO60237 982 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-208ENST00000549537 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
TMEM116-208ENST00000549537 CACNB3P54284 484 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-208ENST00000549537 FAM83AQ86UY5 434 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 WNK4Q96J92 1243 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 CFHR5Q9BXR6 569 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 DENND2AQ9ULE3 1009 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 RFX7Q2KHR2 1363 aa8.22□□□□□ -1.09
TMEM116-208ENST00000549537 KIAA0100Q14667 2235 aaKnown RBP8.21□□□□□ -1.09
TMEM116-208ENST00000549537 LDHBP07195 334 aaKnown RBP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 ZBTB48P10074 688 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 IREB2P48200 963 aaKnown RBP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 TNNI2P48788 182 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 CDC42EP5Q6NZY7 148 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 ANKRD13AQ8IZ07 590 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 ZNF384Q8TF68 577 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 R3HDMLQ9H3Y0 253 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 GNL3LQ9NVN8 582 aaKnown RBP8.21□□□□□ -1.1
TMEM116-208ENST00000549537 AKAP2Q9Y2D5 859 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 GAKO14976 1311 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 MYH2Q9UKX2 1941 aa8.21□□□□□ -1.1
TMEM116-208ENST00000549537 MANSC4A6NHS7 340 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 SREBF2Q12772 1141 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 NFIAQ12857 509 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 MVPQ14764 893 aaKnown RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 ITPRIPQ8IWB1 547 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 FTSJ3Q8IY81 847 aaKnown RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 GPR108Q9NPR9 543 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 NXF1Q9UBU9 619 aaKnown RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
TMEM116-208ENST00000549537 ATRNL1Q5VV63 1379 aa8.2□□□□□ -1.1
TMEM116-208ENST00000549537 IGF2BP3O00425 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
TMEM116-208ENST00000549537 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 ALDH1A1P00352 501 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 INHBEP58166 350 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 G3BP1Q13283 466 aaKnown RBP eCLIP8.19□□□□□ -1.1
TMEM116-208ENST00000549537 DGKZQ13574 1117 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 VGLL4Q14135 290 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 PI16Q6UXB8 463 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 ZGPATQ8N5A5 531 aaKnown RBP8.19□□□□□ -1.1
TMEM116-208ENST00000549537 FAM151AQ8WW52 585 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 PTPN18Q99952 460 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 TMOD2Q9NZR1 351 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
TMEM116-208ENST00000549537 MAST2Q6P0Q8 1798 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 DOCK2Q92608 1830 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 GPR25O00155 361 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 MCAMP43121 646 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 TNNI3KQ59H18 835 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 CEP85Q6P2H3 762 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 ZFPM1Q8IX07 1006 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 SPATA5Q8NB90 893 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
TMEM116-208ENST00000549537 IRF7Q92985 503 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 OPTNQ96CV9 577 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 IDI2Q9BXS1 227 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 ZNF112Q9UJU3 913 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 FPGT-TNNI3KV9GXZ4 949 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 RANBP2P49792 3224 aaKnown RBP8.18□□□□□ -1.1
TMEM116-208ENST00000549537 MROH7-TTC4A0A0A0MT08 1334 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 CUL9Q8IWT3 2517 aa8.18□□□□□ -1.1
TMEM116-208ENST00000549537 GPR75-ASB3A0A0A6YYF3 556 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 SURF6O75683 361 aaKnown RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 WDHD1O75717 1129 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 JUNDP17535 347 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 MFAP1P55081 439 aaKnown RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 RHBDL3P58872 404 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 SKOR1P84550 965 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 MAP3K10Q02779 954 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 MECOMQ03112 1051 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 TCP10Q12799 353 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 TBC1D9Q6ZT07 1266 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 CTU1Q7Z7A3 348 aaKnown RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 DZIP1Q86YF9 867 aaKnown RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 BRI3BPQ8WY22 251 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 ZKSCAN4Q969J2 545 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 NSUN4Q96CB9 384 aaKnown RBP8.17□□□□□ -1.1
TMEM116-208ENST00000549537 WRNIP1Q96S55 665 aa8.17□□□□□ -1.1
TMEM116-208ENST00000549537 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms