RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ZNF165P49910 485 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 WIPI1Q5MNZ9 446 aaPredicted RBP5.05□□□□□ -1.6
APAF1-208ENST00000549007 MKL1Q969V6 931 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 ACSBG1Q96GR2 724 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 ATP13A2Q9NQ11 1180 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 MAP3K6O95382 1288 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 PKDCCQ504Y2 493 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 PLEKHG4Q58EX7 1191 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 STRCP1A6NGW2 1772 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 IRS4O14654 1257 aaPredicted RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 ESRRAP11474 423 aaPredicted RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 PPP2R3AQ06190 1150 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 SSRP1Q08945 709 aaKnown RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 COL9A2Q14055 689 aaPredicted RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 TNNI3KQ59H18 835 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 MICALL1Q8N3F8 863 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 WDR89Q96FK6 387 aaPredicted RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 CARD10Q9BWT7 1032 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 CARD11Q9BXL7 1154 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 PCDHA4Q9UN74 947 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 SMNDC1O75940 238 aaKnown RBP eCLIP5.04□□□□□ -1.6
APAF1-208ENST00000549007 NME2P22392 152 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 RPS26P62854 115 aaKnown RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 PLPPR2Q96GM1 343 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 SOX13Q9UN79 622 aa5.04□□□□□ -1.6
APAF1-208ENST00000549007 SETD1AO15047 1707 aaKnown RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 YTHDC2Q9H6S0 1430 aaKnown RBP5.04□□□□□ -1.6
APAF1-208ENST00000549007 A0A1W2PQH9 124 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 PRAMEF27A3QJZ7 478 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 CTSBP07858 339 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 ITGA6P23229 1130 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 GSTM4Q03013 218 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 PDZD3Q86UT5 571 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 GPBAR1Q8TDU6 330 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 PRAM1Q96QH2 718 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 LRRC3Q9BY71 257 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 ADGRB1O14514 1584 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 DCDC2CA8MYV0 355 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 SOX1O00570 391 aaPredicted RBP5.03□□□□□ -1.6
APAF1-208ENST00000549007 AVPP01185 164 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 ACRP10323 421 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 IKBKEQ14164 716 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 C11orf16Q9NQ32 467 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 TMEM94Q12767 1356 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 UPK3BL1B0FP48 263 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 UPK3BL2E5RIL1 263 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 HTR3BO95264 441 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 ELMSAN1Q6PJG2 1045 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 RAVER1Q8IY67 606 aaKnown RBP5.03□□□□□ -1.6
APAF1-208ENST00000549007 TRIM22Q8IYM9 498 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 LPIN3Q9BQK8 851 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 KLF15Q9UIH9 416 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 ATXN7L1Q9ULK2 861 aaPredicted RBP5.03□□□□□ -1.6
APAF1-208ENST00000549007 TRPM1Q7Z4N2 1603 aa5.03□□□□□ -1.6
APAF1-208ENST00000549007 LTBP3Q9NS15 1303 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 ZNF252P-AS1Q0IIN9 211 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 FXNQ16595 210 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 YOD1Q5VVQ6 348 aaPredicted RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 PSAPL1Q6NUJ1 521 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 KIAA0907Q7Z7F0 614 aaPredicted RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 FAM178BQ8IXR5 827 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 DHX37Q8IY37 1157 aaKnown RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 TMEM260Q9NX78 707 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 POGKQ9P215 609 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 SLC6A14Q9UN76 642 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 LRPPRCP42704 1394 aaKnown RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 RALGAPBQ86X10 1494 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 ARNTP27540 789 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 L1CAMP32004 1257 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 RPL6Q02878 288 aaKnown RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 RASGRF1Q13972 1273 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 OVOS1Q6IE37 1185 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 LRFN4Q6PJG9 635 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 HOMER1Q86YM7 354 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 VWA5B2Q8N398 1253 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 DPH2Q9BQC3 489 aaPredicted RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 DIP2AQ14689 1571 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 MASP1P48740 699 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 TDRD10Q5VZ19 366 aaKnown RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 C12orf40Q86WS4 652 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
APAF1-208ENST00000549007 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
APAF1-208ENST00000549007 LRRC7Q96NW7 1537 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 LTBP4Q8N2S1 1624 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 NEURL1BA8MQ27 555 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 H7C1W4 665 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 FAM153BP0C7A2 387 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 ADH7P40394 386 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 C2orf27AQ580R0 203 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 FOXB2Q5VYV0 432 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 C8orf86Q6ZUL3 223 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 CCDC113Q9H0I3 377 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 RBSNQ9H1K0 784 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 AAASQ9NRG9 546 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 REV1Q9UBZ9 1251 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 CYP8B1Q9UNU6 501 aa5.01□□□□□ -1.61
APAF1-208ENST00000549007 XRN1Q8IZH2 1706 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms