RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
SCRN3-212ENST00000548868 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.29
SCRN3-212ENST00000548868 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
SCRN3-212ENST00000548868 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.3
SCRN3-212ENST00000548868 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 GDF11O95390 407 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 ASNSP08243 561 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 YY1P25490 414 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 EVCP57679 992 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 BRF1Q92994 677 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 ZBTB21Q9ULJ3 1066 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 KIF3CO14782 793 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 GH2P01242 217 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 ARMC9Q7Z3E5 817 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
SCRN3-212ENST00000548868 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
SCRN3-212ENST00000548868 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 UNCXA6NJT0 531 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 NMT2O60551 498 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 TTLL1O95922 423 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 FKBP1BP68106 108 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 MAP3K9P80192 1104 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 BECN1Q14457 450 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 SCYL3Q8IZE3 742 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 ZNF274Q96GC6 653 aaPredicted RBP13.19□□□□□ -0.3
SCRN3-212ENST00000548868 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
SCRN3-212ENST00000548868 TRAF5O00463 557 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
SCRN3-212ENST00000548868 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
SCRN3-212ENST00000548868 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
SCRN3-212ENST00000548868 INPP5BP32019 993 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 RCAN1P53805 252 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 ICA1Q05084 483 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 APOBRQ0VD83 1088 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 SEPT2Q15019 361 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
SCRN3-212ENST00000548868 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
SCRN3-212ENST00000548868 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
SCRN3-212ENST00000548868 KLF18A0A0U1RQI7 1052 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
SCRN3-212ENST00000548868 JAG1P78504 1218 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 PRKG1Q13976 671 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
SCRN3-212ENST00000548868 NBR1Q14596 966 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
SCRN3-212ENST00000548868 MKL1Q969V6 931 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 TMEM47Q9BQJ4 181 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 CSADQ9Y600 493 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
SCRN3-212ENST00000548868 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 DDAH1O94760 285 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 TOMM70O94826 608 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CALM1P0DP23 149 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CALM2P0DP24 149 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CALM3P0DP25 149 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
SCRN3-212ENST00000548868 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 NID2Q14112 1375 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 PTPRFP10586 1907 aa13.16□□□□□ -0.3
SCRN3-212ENST00000548868 ZBTB43O43298 467 aa13.15□□□□□ -0.3
SCRN3-212ENST00000548868 EEF2P13639 858 aaKnown RBP13.15□□□□□ -0.3
SCRN3-212ENST00000548868 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms