RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 C1QTNF9P0C862 333 aa8.46□□□□□ -1.06
CNOT2-215ENST00000548863 SRFP11831 508 aa8.46□□□□□ -1.06
CNOT2-215ENST00000548863 RPL6Q02878 288 aaKnown RBP8.46□□□□□ -1.06
CNOT2-215ENST00000548863 CCDC84Q86UT8 332 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-215ENST00000548863 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
CNOT2-215ENST00000548863 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
CNOT2-215ENST00000548863 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
CNOT2-215ENST00000548863 NFIBO00712 420 aa8.45□□□□□ -1.06
CNOT2-215ENST00000548863 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
CNOT2-215ENST00000548863 TFE3P19532 575 aaPredicted RBP8.45□□□□□ -1.06
CNOT2-215ENST00000548863 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
CNOT2-215ENST00000548863 LCNL1Q6ZST4 164 aa8.45□□□□□ -1.06
CNOT2-215ENST00000548863 MYLIPQ8WY64 445 aa8.45□□□□□ -1.06
CNOT2-215ENST00000548863 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
CNOT2-215ENST00000548863 TRIT1Q9H3H1 467 aaKnown RBP8.45□□□□□ -1.06
CNOT2-215ENST00000548863 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
CNOT2-215ENST00000548863 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-215ENST00000548863 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
CNOT2-215ENST00000548863 DPH2Q9BQC3 489 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-215ENST00000548863 GPR62Q9BZJ7 368 aa8.44□□□□□ -1.06
CNOT2-215ENST00000548863 GLDCP23378 1020 aa8.43□□□□□ -1.06
CNOT2-215ENST00000548863 ST13P50502 369 aaKnown RBP8.43□□□□□ -1.06
CNOT2-215ENST00000548863 DUSP9Q99956 384 aaKnown RBP8.43□□□□□ -1.06
CNOT2-215ENST00000548863 ADAMTS10Q9H324 1103 aa8.43□□□□□ -1.06
CNOT2-215ENST00000548863 EPB41L4BQ9H329 900 aa8.43□□□□□ -1.06
CNOT2-215ENST00000548863 CD320Q9NPF0 282 aa8.43□□□□□ -1.06
CNOT2-215ENST00000548863 DCP1AQ9NPI6 582 aaPredicted RBP8.43□□□□□ -1.06
CNOT2-215ENST00000548863 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 TMEM253P0C7T8 217 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 ZSCAN22P10073 491 aaPredicted RBP8.42□□□□□ -1.06
CNOT2-215ENST00000548863 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
CNOT2-215ENST00000548863 TMEM201Q5SNT2 666 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 CYB5D2Q8WUJ1 264 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 SP110Q9HB58 689 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 RAPGEFL1Q9UHV5 662 aa8.42□□□□□ -1.06
CNOT2-215ENST00000548863 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 ERVFC1P60507 584 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 MAP3K11Q16584 847 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 TSPYL5Q86VY4 417 aaPredicted RBP8.41□□□□□ -1.06
CNOT2-215ENST00000548863 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 PDZD8Q8NEN9 1154 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 SLC26A8Q96RN1 970 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 TRAIPQ9BWF2 469 aa8.41□□□□□ -1.06
CNOT2-215ENST00000548863 HK2P52789 917 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
CNOT2-215ENST00000548863 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
CNOT2-215ENST00000548863 MEI1Q5TIA1 1274 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
CNOT2-215ENST00000548863 SLFN12Q8IYM2 578 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 DTWD2Q8NBA8 298 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 PHC3Q8NDX5 983 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 RNF19AQ9NV58 838 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 KCNH3Q9ULD8 1083 aa8.4□□□□□ -1.06
CNOT2-215ENST00000548863 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 PRR36Q9H6K5 1346 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 WASH4PA8MWX3 477 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 NR0B2Q15466 257 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 KCNA10Q16322 511 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 LILRA2Q8N149 483 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 TLR6Q9Y2C9 796 aa8.39□□□□□ -1.07
CNOT2-215ENST00000548863 FAM221AA4D161 298 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 CILPO75339 1184 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 ZGLP1P0C6A0 271 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
CNOT2-215ENST00000548863 DAB2P98082 770 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 ATG14Q6ZNE5 492 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
CNOT2-215ENST00000548863 KRTAP4-2Q9BYR5 136 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 DUSP13Q9UII6 198 aa8.38□□□□□ -1.07
CNOT2-215ENST00000548863 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
CNOT2-215ENST00000548863 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
CNOT2-215ENST00000548863 ETV2O00321 342 aaPredicted RBP8.37□□□□□ -1.07
CNOT2-215ENST00000548863 OXR1Q8N573 874 aa8.37□□□□□ -1.07
CNOT2-215ENST00000548863 KCNK12Q9HB15 430 aa8.37□□□□□ -1.07
CNOT2-215ENST00000548863 CORINQ9Y5Q5 1042 aa8.37□□□□□ -1.07
CNOT2-215ENST00000548863 FITM1A5D6W6 292 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 PLCG1P19174 1290 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 EGR3Q06889 387 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 TTLL10Q6ZVT0 673 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 IRF2BP1Q8IU81 584 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 DHX38Q92620 1227 aaKnown RBP8.36□□□□□ -1.07
CNOT2-215ENST00000548863 KCNN1Q92952 543 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
CNOT2-215ENST00000548863 SMG5Q9UPR3 1016 aaKnown RBP8.36□□□□□ -1.07
CNOT2-215ENST00000548863 TCAF2A6NFQ2 919 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 UPK3BL1B0FP48 263 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 UPK3BL2E5RIL1 263 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 LMNB2Q03252 620 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 GATAD2BQ8WXI9 593 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 RNF32Q9H0A6 362 aa8.35□□□□□ -1.07
CNOT2-215ENST00000548863 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
CNOT2-215ENST00000548863 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
CNOT2-215ENST00000548863 CTSHP09668 335 aa8.34□□□□□ -1.07
CNOT2-215ENST00000548863 CAMK2GQ13555 558 aaPredicted RBP8.34□□□□□ -1.07
CNOT2-215ENST00000548863 SNX17Q15036 470 aa8.34□□□□□ -1.07
CNOT2-215ENST00000548863 CIAPIN1Q6FI81 312 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms