RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 SETDB2Q96T68 719 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 NAPAP54920 295 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 DIXDC1Q155Q3 683 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 INF2Q27J81 1249 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 GSG1L2A8MUP6 293 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 GNPATO15228 680 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 EVX2Q03828 476 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 IMPACTQ9P2X3 320 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 SRP68Q9UHB9 627 aaKnown RBP16.04■□□□□ 0.16
CACNB3-209ENST00000548860 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
CACNB3-209ENST00000548860 MMP1P03956 469 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 IQUBQ8NA54 791 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 GDAQ9Y2T3 454 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 PRDX5P30044 214 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 TXKP42681 527 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 CARD10Q9BWT7 1032 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 ZSCAN20P17040 1043 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-209ENST00000548860 DMTNQ08495 405 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 NBPF11Q86T75 865 aa16.03■□□□□ 0.16
CACNB3-209ENST00000548860 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-209ENST00000548860 CRACR2BQ8N4Y2 399 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-209ENST00000548860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
CACNB3-209ENST00000548860 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-209ENST00000548860 KIF13AQ9H1H9 1805 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 TRIM49BA6NDI0 452 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 SF3A3Q12874 501 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACNB3-209ENST00000548860 MLKLQ8NB16 471 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 GPCPD1Q9NPB8 672 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.16
CACNB3-209ENST00000548860 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.15
CACNB3-209ENST00000548860 TNNI2P48788 182 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 SIK1P57059 783 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 NELFBQ8WX92 580 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 REREQ9P2R6 1566 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 CTAGE9A4FU28 777 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 USP17L3A6NCW0 530 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 USP17L4A6NCW7 530 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 CHMP4BP1P59074 171 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 KANK3Q6NY19 840 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 SARM1Q6SZW1 724 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 LEKR1Q6ZMV7 388 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.15
CACNB3-209ENST00000548860 USP17L1Q7RTZ2 530 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 GTPBP4Q9BZE4 634 aaKnown RBP16.02■□□□□ 0.15
CACNB3-209ENST00000548860 TCP11L1Q9NUJ3 509 aa16.02■□□□□ 0.15
CACNB3-209ENST00000548860 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.15
CACNB3-209ENST00000548860 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
CACNB3-209ENST00000548860 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
CACNB3-209ENST00000548860 CCDC122Q5T0U0 273 aa16.01■□□□□ 0.15
CACNB3-209ENST00000548860 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
CACNB3-209ENST00000548860 AKR1B10O60218 316 aa16.01■□□□□ 0.15
CACNB3-209ENST00000548860 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
CACNB3-209ENST00000548860 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
CACNB3-209ENST00000548860 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 A0A0U1RQJ8 604 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 VSTM4Q8IW00 320 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 ATRIPQ8WXE1 791 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 FAM107BQ9H098 131 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
CACNB3-209ENST00000548860 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
CACNB3-209ENST00000548860 ERLIN1O75477 346 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 CTAGE8P0CG41 777 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 IFNAR1P17181 557 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 SLC35F6Q8N357 371 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 FAM207AQ9NSI2 230 aaPredicted RBP16■□□□□ 0.15
CACNB3-209ENST00000548860 MROH5Q6ZUA9 1318 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
CACNB3-209ENST00000548860 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 RGS22Q8NE09 1264 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 HPS3Q969F9 1004 aa16■□□□□ 0.15
CACNB3-209ENST00000548860 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 GNAT2P19087 354 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 CDC25BP30305 580 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 KIF5BP33176 963 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 BIN2Q9UBW5 565 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 FRMPD2Q68DX3 1309 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 KLRK1P26718 216 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 CYP27A1Q02318 531 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 TBC1D8BQ0IIM8 1120 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 CUL4BQ13620 913 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 TCERG1LQ5VWI1 586 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 TMX4Q9H1E5 349 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms