RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 USP17L19D6RCP7 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L20D6RJB6 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 ADCY3O60266 1144 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 EN2P19622 333 aaPredicted RBP13.69□□□□□ -0.22
BEST3-209ENST00000548658 HERVK_113P62684 666 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L24Q0WX57 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 TMEM179Q6ZVK1 233 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 YTHDC1Q96MU7 727 aaKnown RBP13.69□□□□□ -0.22
BEST3-209ENST00000548658 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
BEST3-209ENST00000548658 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
BEST3-209ENST00000548658 MGAMO43451 1857 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 USP17L21D6R901 530 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
BEST3-209ENST00000548658 PRKAB2O43741 272 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
BEST3-209ENST00000548658 SHROOM1Q2M3G4 852 aaPredicted RBP13.68□□□□□ -0.22
BEST3-209ENST00000548658 C12orf60Q5U649 245 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
BEST3-209ENST00000548658 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 GABRQQ9UN88 632 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
BEST3-209ENST00000548658 ZSWIM8A7E2V4 1837 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
BEST3-209ENST00000548658 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
BEST3-209ENST00000548658 GJB1P08034 283 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 GNAT2P19087 354 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 MAPK4P31152 587 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 SEPT2Q15019 361 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
BEST3-209ENST00000548658 APPBP2Q92624 585 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
BEST3-209ENST00000548658 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
BEST3-209ENST00000548658 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
BEST3-209ENST00000548658 NAV1Q8NEY1 1877 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 CCNA1P78396 465 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
BEST3-209ENST00000548658 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
BEST3-209ENST00000548658 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 CATSPERGQ6ZRH7 1159 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 STRBPQ96SI9 672 aaKnown RBP13.66□□□□□ -0.22
BEST3-209ENST00000548658 CRBNQ96SW2 442 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 ARHGEF10LQ9HCE6 1279 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 MYH7P12883 1935 aa13.66□□□□□ -0.22
BEST3-209ENST00000548658 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
BEST3-209ENST00000548658 CYP2D6P10635 497 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 CCL5P13501 91 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 VCAM1P19320 739 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 MX1P20591 662 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 GUCY1A2P33402 732 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 GJA8P48165 433 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 CDK8P49336 464 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 ERVK-24P63145 666 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 MTFR1Q15390 333 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 CTR9Q6PD62 1173 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 C16orf86Q6ZW13 317 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 SOCS4Q8WXH5 440 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 LPAR1Q92633 364 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 NUDT12Q9BQG2 462 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 ZNF287Q9HBT7 754 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
BEST3-209ENST00000548658 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
BEST3-209ENST00000548658 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
BEST3-209ENST00000548658 COG2Q14746 738 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 TRMT44Q8IYL2 757 aaKnown RBP13.64□□□□□ -0.23
BEST3-209ENST00000548658 SLC44A5Q8NCS7 719 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 NACAP1Q9BZK3 213 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 TXNRD2Q9NNW7 524 aa13.64□□□□□ -0.23
BEST3-209ENST00000548658 GSG1L2A8MUP6 293 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
BEST3-209ENST00000548658 GPAA1O43292 621 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 HMGCRP04035 888 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 CHGBP05060 677 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 APPP05067 770 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 INHAP05111 366 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 ELNP15502 786 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 ICA1Q05084 483 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 TICAM2Q86XR7 235 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
BEST3-209ENST00000548658 RWDD1Q9H446 243 aaPredicted RBP13.63□□□□□ -0.23
BEST3-209ENST00000548658 RPAP3Q9H6T3 665 aaPredicted RBP13.63□□□□□ -0.23
BEST3-209ENST00000548658 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms