RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DAXXQ9UER7 740 aaPredicted RBP33.73■■■□□ 2.99
BRF1-213ENST00000548421 STX8Q9UNK0 236 aa33.73■■■□□ 2.99
BRF1-213ENST00000548421 MYH4Q9Y623 1939 aa33.73■■■□□ 2.99
BRF1-213ENST00000548421 LARGE1O95461 756 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 GH2P01242 217 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 CAP2P40123 477 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 NOVP48745 357 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 SHROOM1Q2M3G4 852 aaPredicted RBP33.72■■■□□ 2.99
BRF1-213ENST00000548421 DLK2Q6UY11 383 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 NAP1L2Q9ULW6 460 aaPredicted RBP33.72■■■□□ 2.99
BRF1-213ENST00000548421 SLC12A7Q9Y666 1083 aa33.72■■■□□ 2.99
BRF1-213ENST00000548421 MAP1SQ66K74 1059 aaPredicted RBP33.71■■■□□ 2.99
BRF1-213ENST00000548421 DOCK1Q14185 1865 aa33.71■■■□□ 2.99
BRF1-213ENST00000548421 APOA5Q6Q788 366 aa33.7■■■□□ 2.99
BRF1-213ENST00000548421 KANSL2Q9H9L4 492 aa33.7■■■□□ 2.99
BRF1-213ENST00000548421 ZNF112Q9UJU3 913 aa33.7■■■□□ 2.99
BRF1-213ENST00000548421 ZBTB21Q9ULJ3 1066 aa33.7■■■□□ 2.99
BRF1-213ENST00000548421 GOLGA8BA8MQT2 603 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 PDIA3P30101 505 aaKnown RBP33.69■■■□□ 2.98
BRF1-213ENST00000548421 NF2P35240 595 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 SYNE3Q6ZMZ3 975 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 KAT14Q9H8E8 782 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 CTNND1O60716 968 aaKnown RBP33.69■■■□□ 2.98
BRF1-213ENST00000548421 TTLL1O95922 423 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 GUCY1A2P33402 732 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 JAG1P78504 1218 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 SEPT2Q15019 361 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 ZNF654Q8IZM8 581 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 SLKQ9H2G2 1235 aaPredicted RBP33.69■■■□□ 2.98
BRF1-213ENST00000548421 GINM1Q9NU53 330 aa33.69■■■□□ 2.98
BRF1-213ENST00000548421 ZBTB43O43298 467 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 PFKFB2O60825 505 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 ASNSP08243 561 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 SLC4A3P48751 1232 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 STK3Q13188 491 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 RAB3GAP1Q15042 981 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 CATIPQ7Z7H3 387 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 WRNIP1Q96S55 665 aa33.68■■■□□ 2.98
BRF1-213ENST00000548421 TOP1P11387 765 aaKnown RBP33.67■■■□□ 2.98
BRF1-213ENST00000548421 RCAN1P53805 252 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 ICA1Q05084 483 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 CUL4AQ13619 759 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 CLEC10AQ8IUN9 316 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 TMEM47Q9BQJ4 181 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 PAPPA2Q9BXP8 1791 aa33.67■■■□□ 2.98
BRF1-213ENST00000548421 PPP1R12BO60237 982 aaPredicted RBP33.66■■■□□ 2.98
BRF1-213ENST00000548421 MICU3Q86XE3 530 aa33.66■■■□□ 2.98
BRF1-213ENST00000548421 GTF3C6Q969F1 213 aa33.66■■■□□ 2.98
BRF1-213ENST00000548421 KLRG1Q96E93 195 aa33.66■■■□□ 2.98
BRF1-213ENST00000548421 GPBP1L1Q9HC44 474 aaPredicted RBP33.66■■■□□ 2.98
BRF1-213ENST00000548421 NECAB1Q8N987 351 aa33.65■■■□□ 2.98
BRF1-213ENST00000548421 PNMA1Q8ND90 353 aa33.65■■■□□ 2.98
BRF1-213ENST00000548421 NYAP2Q9P242 653 aa33.65■■■□□ 2.98
BRF1-213ENST00000548421 FZD1Q9UP38 647 aa33.65■■■□□ 2.98
BRF1-213ENST00000548421 HPS5Q9UPZ3 1129 aa33.65■■■□□ 2.98
BRF1-213ENST00000548421 OTOFQ9HC10 1997 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 DDAH1O94760 285 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 INPP5BP32019 993 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 MYL10Q9BUA6 226 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 CLIP2Q9UDT6 1046 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 NID2Q14112 1375 aa33.64■■■□□ 2.98
BRF1-213ENST00000548421 USP2O75604 605 aaPredicted RBP33.63■■■□□ 2.97
BRF1-213ENST00000548421 HSP90AA1P07900 732 aaKnown RBP33.63■■■□□ 2.97
BRF1-213ENST00000548421 METAP2P50579 478 aaKnown RBP eCLIP33.63■■■□□ 2.97
BRF1-213ENST00000548421 SCRN1Q12765 414 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 PRKG1Q13976 671 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 RAB11FIP4Q86YS3 637 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 CCDC83Q8IWF9 413 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 CALM1P0DP23 149 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 CALM2P0DP24 149 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 CALM3P0DP25 149 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 EEF2P13639 858 aaKnown RBP33.63■■■□□ 2.97
BRF1-213ENST00000548421 CCT2P78371 535 aaKnown RBP33.63■■■□□ 2.97
BRF1-213ENST00000548421 ATP2B2Q01814 1243 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 TROAPQ12815 778 aa33.63■■■□□ 2.97
BRF1-213ENST00000548421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.63■■■□□ 2.97
BRF1-213ENST00000548421 GOLGA8AA7E2F4 631 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 RXRAP19793 462 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 ST3GAL1Q11201 340 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 SCYL3Q8IZE3 742 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 NUP133Q8WUM0 1156 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 MKL1Q969V6 931 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 CHMP4CQ96CF2 233 aa33.62■■■□□ 2.97
BRF1-213ENST00000548421 TRAF5O00463 557 aa33.61■■■□□ 2.97
BRF1-213ENST00000548421 IREB2P48200 963 aaKnown RBP33.61■■■□□ 2.97
BRF1-213ENST00000548421 CHADLQ6NUI6 762 aa33.61■■■□□ 2.97
BRF1-213ENST00000548421 LRRC47Q8N1G4 583 aaKnown RBP33.61■■■□□ 2.97
BRF1-213ENST00000548421 INTS4Q96HW7 963 aaKnown RBP33.61■■■□□ 2.97
BRF1-213ENST00000548421 NOL9Q5SY16 702 aaKnown RBP33.6■■■□□ 2.97
BRF1-213ENST00000548421 SIAH1Q8IUQ4 282 aa33.6■■■□□ 2.97
BRF1-213ENST00000548421 ZKSCAN4Q969J2 545 aaPredicted RBP33.6■■■□□ 2.97
BRF1-213ENST00000548421 ARHGEF10LQ9HCE6 1279 aa33.6■■■□□ 2.97
BRF1-213ENST00000548421 CCDC144CPQ8IYA2 1237 aa33.59■■■□□ 2.97
BRF1-213ENST00000548421 NCOA5Q9HCD5 579 aaKnown RBP33.59■■■□□ 2.97
BRF1-213ENST00000548421 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.59■■■□□ 2.97
BRF1-213ENST00000548421 DHX16O60231 1041 aaKnown RBP33.58■■■□□ 2.97
BRF1-213ENST00000548421 PPP2R5BQ15173 497 aa33.58■■■□□ 2.97
BRF1-213ENST00000548421 RTN1Q16799 776 aa33.58■■■□□ 2.97
BRF1-213ENST00000548421 FANCBQ8NB91 859 aa33.58■■■□□ 2.97
BRF1-213ENST00000548421 MAP3K14Q99558 947 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms