RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 PRAMEF27A3QJZ7 478 aa4.47□□□□□ -1.69
CEP290-204ENST00000547926 NOTOA8MTQ0 251 aa4.47□□□□□ -1.69
CEP290-204ENST00000547926 ZXDAP98168 799 aa4.47□□□□□ -1.69
CEP290-204ENST00000547926 FKBP4Q02790 459 aaKnown RBP eCLIP4.47□□□□□ -1.69
CEP290-204ENST00000547926 CDH24Q86UP0 819 aa4.47□□□□□ -1.69
CEP290-204ENST00000547926 EIF1AYO14602 144 aaKnown RBP4.46□□□□□ -1.69
CEP290-204ENST00000547926 IGHA2P01877 340 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 NME2P22392 152 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 PPP2R3AQ06190 1150 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 GAB4Q2WGN9 574 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 SPATS1Q496A3 300 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 TMEFF1Q8IYR6 380 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 TP53I13Q8NBR0 393 aaPredicted RBP4.46□□□□□ -1.69
CEP290-204ENST00000547926 SLC16A11Q8NCK7 471 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 PDZD8Q8NEN9 1154 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 SCAND2PQ9GZW5 306 aaPredicted RBP4.46□□□□□ -1.69
CEP290-204ENST00000547926 IRAK3Q9Y616 596 aa4.46□□□□□ -1.69
CEP290-204ENST00000547926 LRFN4Q6PJG9 635 aa4.46□□□□□ -1.7
CEP290-204ENST00000547926 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.46□□□□□ -1.7
CEP290-204ENST00000547926 TXNDC2Q86VQ3 553 aa4.46□□□□□ -1.7
CEP290-204ENST00000547926 BORCS6Q96GS4 357 aa4.46□□□□□ -1.7
CEP290-204ENST00000547926 SIGLEC10Q96LC7 697 aa4.46□□□□□ -1.7
CEP290-204ENST00000547926 PCDHA4Q9UN74 947 aa4.46□□□□□ -1.7
CEP290-204ENST00000547926 RFXAPO00287 272 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 GPR182O15218 404 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 FBXO24O75426 580 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 TPP2P29144 1249 aaPredicted RBP4.45□□□□□ -1.7
CEP290-204ENST00000547926 B4GALNT3Q6L9W6 998 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 TEPSINQ96N21 525 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 DPH2Q9BQC3 489 aaPredicted RBP4.45□□□□□ -1.7
CEP290-204ENST00000547926 GPR160Q9UJ42 338 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 MTMR7Q9Y216 660 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 AKAP2Q9Y2D5 859 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 H3BRB1 525 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
CEP290-204ENST00000547926 EGR3Q06889 387 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 PRAMEF13Q5VWM6 474 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 TMEM151BQ8IW70 566 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 TUT1Q9H6E5 874 aaKnown RBP4.45□□□□□ -1.7
CEP290-204ENST00000547926 CNTD2Q9H8S5 307 aa4.45□□□□□ -1.7
CEP290-204ENST00000547926 ENC1O14682 589 aa4.44□□□□□ -1.7
CEP290-204ENST00000547926 ICMTO60725 284 aa4.44□□□□□ -1.7
CEP290-204ENST00000547926 FSHBP01225 129 aa4.44□□□□□ -1.7
CEP290-204ENST00000547926 SF3B2Q13435 895 aaKnown RBP4.44□□□□□ -1.7
CEP290-204ENST00000547926 MYRFQ9Y2G1 1151 aa4.44□□□□□ -1.7
CEP290-204ENST00000547926 MATN3O15232 486 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 PDE4CQ08493 712 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 ADGRF1Q5T601 910 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 TMPRSS7Q7RTY8 843 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 NIF3L1Q9GZT8 377 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 ZNF507Q8TCN5 953 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 VWCEQ96DN2 955 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 PLPPR2Q96GM1 343 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 GPR20Q99678 358 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 CWC22Q9HCG8 908 aaKnown RBP4.43□□□□□ -1.7
CEP290-204ENST00000547926 EGFL7Q9UHF1 273 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 PCDHA11Q9Y5I1 949 aa4.43□□□□□ -1.7
CEP290-204ENST00000547926 BRD1O95696 1058 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 ARHGAP4P98171 946 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 TPTE2Q6XPS3 522 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 FAM129CQ86XR2 697 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 GLYCTKQ8IVS8 523 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 NECAB3Q96P71 396 aaPredicted RBP4.42□□□□□ -1.7
CEP290-204ENST00000547926 VIPR1P32241 457 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 NXPE4Q6UWF7 544 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 ELMO3Q96BJ8 720 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 FAM129BQ96TA1 746 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 BCO2Q9BYV7 579 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 TRAK1Q9UPV9 953 aa4.42□□□□□ -1.7
CEP290-204ENST00000547926 IRS4O14654 1257 aaPredicted RBP4.41□□□□□ -1.7
CEP290-204ENST00000547926 N4BP3O15049 544 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 CDR1P51861 262 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 NR0B2Q15466 257 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 FERMT3Q86UX7 667 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 ADGRG2Q8IZP9 1017 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 LILRA2Q8N149 483 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 C3orf58Q8NDZ4 430 aa4.41□□□□□ -1.7
CEP290-204ENST00000547926 ZC3H12DA2A288 527 aaKnown RBP4.4□□□□□ -1.7
CEP290-204ENST00000547926 FITM1A5D6W6 292 aa4.4□□□□□ -1.7
CEP290-204ENST00000547926 TRIM37O94972 964 aa4.4□□□□□ -1.7
CEP290-204ENST00000547926 KIR3DS1Q14943 382 aa4.4□□□□□ -1.7
CEP290-204ENST00000547926 FRMD5Q7Z6J6 570 aa4.4□□□□□ -1.7
CEP290-204ENST00000547926 MFSD2AQ8NA29 543 aa4.4□□□□□ -1.7
CEP290-204ENST00000547926 GRIN3BO60391 1043 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 LRRN2O75325 713 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 CILPO75339 1184 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 SLPIP03973 132 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 NCKAP1LP55160 1127 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 CNKSR3Q6P9H4 555 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 IGDCC3Q8IVU1 814 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 OXR1Q8N573 874 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 KCT2Q8NC54 265 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 LUC7LQ9NQ29 371 aaKnown RBP4.4□□□□□ -1.71
CEP290-204ENST00000547926 BRPF3Q9ULD4 1205 aa4.4□□□□□ -1.71
CEP290-204ENST00000547926 GNEQ9Y223 722 aaKnown RBP4.4□□□□□ -1.71
CEP290-204ENST00000547926 SOWAHDA6NJG2 315 aa4.39□□□□□ -1.71
CEP290-204ENST00000547926 HNRNPUQ00839 825 aaKnown RBP eCLIP4.39□□□□□ -1.71
CEP290-204ENST00000547926 SP8Q8IXZ3 490 aa4.39□□□□□ -1.71
CEP290-204ENST00000547926 SORCS2Q96PQ0 1159 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms